| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4477 |
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| Symbol | |
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| ID | 7972765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4725704 |
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| End bp | 4726651 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795066 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946354 |
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| Protein GI | 239817444 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.631102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACG CGACCCTGCG CCAGTTGAAA GTCTTCGAAG CGGTGGCGCG GCTGCTGAGC
TTCTCGCGCG CGGCGGAGGA GCTTCACCTG ACGCAGCCGG CCGTTTCCAC GCAGGTGCGC
AAGCTCGAGG AACACGCGGG CAATGCGCTG TTCGAGCAGT TCGGCAAGAA GATCTACCTG
ACGCCGGCCG GCACCGAGCT GCTGCAGATC AGCCGCGCGA TCATCCAGCA GTTCGAGGCG
GCCGAGAACG CGATGCTGCA GTTCAACGGC GTCTCGGGCG GCAAGCTCAA CGTGGGCGTG
ATCAGCGCGG GCGACTACTT CTTTCCGCGC CTGCTGGTGG AGTTTGCGAG CCGGCACCGC
GGCGTCACGC TGAACTTCAC GGTGCACAAC CGCGAAGGGC TCATGACCCA CATCGCCGAG
AACCTCACCG ACCTGGCGAT CATGGTGCGC CCGCCGACCG ACCTGGACAC CGTCAACCAG
CCGTTCGCGC CGCATCCCTA CGTGATCGTC GCGGCACCCA GCCACCCGCT GGTGGGCGTG
CCGCGCATCC CGCTCGCGCG GCTCATGCGC GAGCCCTTCG TGGTGCGCGA GAAGGCCTCG
GACACCTGGC ATTCGATGGA AGAGGGCTTC GGCGGCGACC TGCGCGGCAT CAACATCGCG
ATGGAGATCC GCAGCACCGA GACCATCAAG CAGGCCGTGA TCGCGGGCAT GGGCGTGAGC
TTCGTGTCGG CCCACACCAT CAGCCAGGAG CTGCGCGCCG GCAGCCTGCG CGTGCTCGAC
GTCGAGGGCT TTCCGCTGAT GCTCAACTGG TACGTGGTGC ACCGGCGCAG CAAGCGGCTG
CCGCCGGTGG CGCAGGCCTT CAAGGACTTC CTGCTGGCCG ACGGACCCGC GCTCATTTCG
CAGATCGTGC CGTTCGAGAG TCCCAACGAA AAAGAGCGCG GCGAATAA
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| Protein sequence | MKHATLRQLK VFEAVARLLS FSRAAEELHL TQPAVSTQVR KLEEHAGNAL FEQFGKKIYL
TPAGTELLQI SRAIIQQFEA AENAMLQFNG VSGGKLNVGV ISAGDYFFPR LLVEFASRHR
GVTLNFTVHN REGLMTHIAE NLTDLAIMVR PPTDLDTVNQ PFAPHPYVIV AAPSHPLVGV
PRIPLARLMR EPFVVREKAS DTWHSMEEGF GGDLRGINIA MEIRSTETIK QAVIAGMGVS
FVSAHTISQE LRAGSLRVLD VEGFPLMLNW YVVHRRSKRL PPVAQAFKDF LLADGPALIS
QIVPFESPNE KERGE
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