| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4475 |
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| Symbol | |
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| ID | 7972763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4723697 |
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| End bp | 4725022 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795064 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002946352 |
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| Protein GI | 239817442 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.220885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCGGC CCACCTCCAC GATCGCAGGT TCCAATCCTG CGATGTATTC CCCATCCGAA
ACCTACGGCA CCGGCGCGAC CCGTTCCGAG GCCTACCGAT GGGGCCAGCT GCTGATCGGC
ATCGTCTGCA TGGCGATGAT CGCCAACCTG CAATACGGCT GGACGCTGTT CGTCAATCCG
ATCGCGGAGA AGCACGGCTG GAGCCGCGCC GCCATCCAGG TGGCCTTCAC CATCTTCGTG
CTCACGGAAA CATGGCTCGT GCCGATCGAA GGCTACCTCG TCGACCGCTT CGGCCCGCGG
CCGGTGGTGC TCGTGGGCGG CATCCTGTGC GGCCTCGGCT GGGTGATCAA CTCGGTGGCT
TCCACGCTGC CGCTGCTCTA CATTGCGGCG GCCATCGGCG GCATCGGCGC GGGCGCGGTG
TACGGCACCT GCGTGGGCAA TGCGCTCAAG TGGTTTCCCG ACCGGCGCGG CCTTGCGGCC
GGCATGACGG CCGCGGGCTT CGGCGCAGGC TCGGCGCTCA CCATCATCCC TATCTCCGCG
ATGATCCGCA CCAGCGGCTA CGAGGCGGCG TTCCTGTATT TTGGGATCGG GCAGGGACTC
ATCGTGTTCC TGCTCGCATG GATGCTGACC CGCGCGCCCC ACCACGCGAA GGCATCGAAC
AGCCGCAACG TGCAGCAGGC GGGCCGCGAC TACGCGCCCT CCGAGGTGCT GCGTTCGCCC
GTCTTCTGGG TGATGTACGC GATGTTCGTG ATGGTGGCCG CGGGCGGCCT CATGGCCACC
GCCCAGCTCG CGCCGATCGC GCAGGACTTC AAGATCATGG ACGTGCCCGT CAACATCATG
GGCCTGGTGC TGCCCGCGCT GACCTTCGCG CTGGCGATCG ACCGCGTGCT CAACGGACTC
ACGCGGCCTT TCTTCGGCTG GGTGTCCGAC AAGATCGGGC GCGAGCAGAC GATGTTCATT
GCGTTCGCGC TCGAGTCGGT GGGCATCCTG ATGCTCTATC ACTACGGCCA CAACCCGATC
CTCTTCGTGG TGCTCACCGG CATCGTGTTC TTTGCCTGGG GCGAGATCTA CAGCCTCTTT
CCTTCGACCT GCGCCGACAC CTTCGGCTCC AGGTACGCGG CGTCCAACGC CGGCATGCTC
TACACCGCCA AGGGCACGGC CTCGCTGCTG GTGCCGCTGT CCAGCGTGCT TGCGGCAGCC
ACCGGCAGCT GGCAGGCCGT CTTCATTGCC GCGAGCGCGG TCAATGCGGC TGCGGCGCTG
CTGGCCTGGT TCGTGTTGCG GCCGATGCGG CGCAAGCACA TCGAACAGAG CCGGCTTTCT
TCGTAG
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| Protein sequence | MTRPTSTIAG SNPAMYSPSE TYGTGATRSE AYRWGQLLIG IVCMAMIANL QYGWTLFVNP
IAEKHGWSRA AIQVAFTIFV LTETWLVPIE GYLVDRFGPR PVVLVGGILC GLGWVINSVA
STLPLLYIAA AIGGIGAGAV YGTCVGNALK WFPDRRGLAA GMTAAGFGAG SALTIIPISA
MIRTSGYEAA FLYFGIGQGL IVFLLAWMLT RAPHHAKASN SRNVQQAGRD YAPSEVLRSP
VFWVMYAMFV MVAAGGLMAT AQLAPIAQDF KIMDVPVNIM GLVLPALTFA LAIDRVLNGL
TRPFFGWVSD KIGREQTMFI AFALESVGIL MLYHYGHNPI LFVVLTGIVF FAWGEIYSLF
PSTCADTFGS RYAASNAGML YTAKGTASLL VPLSSVLAAA TGSWQAVFIA ASAVNAAAAL
LAWFVLRPMR RKHIEQSRLS S
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