| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4446 |
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| Symbol | |
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| ID | 7974120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4686977 |
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| End bp | 4688260 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795035 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002946323 |
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| Protein GI | 239817413 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC CTCGCGAAAA TCTCCCAGAG ACAGGCAGCG AAACTTATCT TTTCGCATCC
GCCAATGGCA GTCACATCAC TTGGCTGACC GATGCTCTGA GCCATGAAGG CTCGGTCGTC
GTTCTGAGCC AGGACGCCAA GTCGATCGAC GAACGCATTT CGCTGCTCGG ACCGGTGGCA
GTGTTCATCG ATTTCTCTCC CGAACAGAGC GCAGCTGCCG CTGAGCTTCA TCAACGGCTC
AAGCGCGACT GGCCGACCTT GCCCGTGCTG GCCGCCGGCG TCTCTTCGCA GCCTGCTGCA
ATGCTCGCCG CCCTTCGCGC CGGCGTGGAC GATTTCATCG ACATTTCGGC TCCTCCTGAC
GAGGCCGTGA ACACCTTGCG CGCGCTTCTC GAAAAGCGGC GGTCGCTCCC GGGCGGACTG
CGCGGAAGCA CATTGGCACT GCTAGGCGCG CGCGCGGGCC TGGGTGTGAC CACATTGGCT
GCGAGCCTTG CTCTCACGCT GCACGATCAG CTGGCGCAGG CGCCCGCACG CCCGCCAGGC
CGCAGTGGGC GACACGGCGT CGCATTGCTC GACCTCGGTC TTCCTGCGCG CGATGGCCTG
CTGTATCTCA ATACGCAAAG TGGCTTCAGC TTTGTGGATG GCGTGCGCAA TCTGCGACGG
CTGGACCAAA CTCTGCTGCA CACGGCGCTG GCTCACCACA CCAGCGGCGT GGCCGTGCTG
CCGCTGCCGG CGAATCTGGC GCAAGTGCGT GAAATCTCCC ATGCCGACTC CGTCACTCTG
ATCCGGCGTT TGGCCGATTT CTTCGACTTT CAGATTGCCG ATCTCGGTGG GTTCTCGACG
GTCGACTTCA TGGCCCAGAC CGTGCGCGAA GCGCAAAACA CCTGGGTCGT ATGCGACCAG
AGCATCGGCG CGATTGTGTC GACGGCCAAC ATGCTCAAGG AACTGCGCGC ACGCAACGTC
GAGACCGAGC GGTTGATGCT GGTCGTGAAC AAGTTCGATC GTCATGTGGG CCTCTCCGCC
AAGGACATCG CCGAGCGTCT CGAACTGCCG CTGCAGCATG TGCTGCCCGC ACGCAGCACC
CAGCTGCTGG CCGCAGGCTG CCGAGGCGAA ATGCTCGTGC GCGCGGCCCG CAATGATCCC
TACGTACAGG CCGTTGGTGG CCTCGCACGT ACCCTGCACC AGGAATACAT GTCCGTCACC
GGCCAACCCC CGCCCAAGGA TCCACGCTGG GCTGCGCTGA TGTCGCAGAT CACCGGCTTC
TGGAAGAGTT CAAACGAAGG TTGA
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| Protein sequence | MNAPRENLPE TGSETYLFAS ANGSHITWLT DALSHEGSVV VLSQDAKSID ERISLLGPVA
VFIDFSPEQS AAAAELHQRL KRDWPTLPVL AAGVSSQPAA MLAALRAGVD DFIDISAPPD
EAVNTLRALL EKRRSLPGGL RGSTLALLGA RAGLGVTTLA ASLALTLHDQ LAQAPARPPG
RSGRHGVALL DLGLPARDGL LYLNTQSGFS FVDGVRNLRR LDQTLLHTAL AHHTSGVAVL
PLPANLAQVR EISHADSVTL IRRLADFFDF QIADLGGFST VDFMAQTVRE AQNTWVVCDQ
SIGAIVSTAN MLKELRARNV ETERLMLVVN KFDRHVGLSA KDIAERLELP LQHVLPARST
QLLAAGCRGE MLVRAARNDP YVQAVGGLAR TLHQEYMSVT GQPPPKDPRW AALMSQITGF
WKSSNEG
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