| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4437 |
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| Symbol | |
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| ID | 7974111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4676955 |
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| End bp | 4678418 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795026 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946314 |
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| Protein GI | 239817404 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4222] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATTC GCTTCGCCTC GTCGAGGCTG CCGCGCCACC TGATGCTGGC GGTCGTTTCT
TCTGCTGCCC TTGCCGCGTG CGGCGGCGGC AATGGCGGCG GCATCGCCTT TCCGCCGCTG
GTGGGCGCGC CCGCTCCGGC ACCGGCGCCT GCGCCCGCAC CTGCTCCCCA GCCTCCGCAG
GACGACGGCG CGGGACTGCC TCACAAGCTG ACCGGTTGGG CCTCCCTGGC CGATACGTTC
CGCTGGCCCG GCCCGACCAC GGGCCAGTTC ATCACCGCCG CGCTCGGCGT GGCGCCGCCC
TTCGTCGATG CGCAGCCTGT TCCGGGCTTC TCGGCGCTGC TGAAGAACGA TGACGGCACC
TGGACTGCCA TGCCCGACAA CGGCTACGGC AGCAAGAGCA ACTCCGGCGA CTTCGTGGTC
GGCTTCTACA ACGTCAGCAT CGACTTCCGC ACCGTGGCCA ACGGCACGAC GGTGCCCGGC
ACCGTCAAGG TGAACAGCCG CGTCAATTTC AACGACGCCA ACGGCTTCCT GAAAGACGGC
AAGGGCGTCG ACCTGAAGAT CACGGCCGAC TTCGCCAACT ACCAGACGGT CTCCGGCAAC
AACCTGGTCG ACAGCGGCAA GCCGGTGGAT CCGCGCATCG TCGGCGGCCG GCTGCTGACG
GGCTTCGACC TGGACGTCGA GTCGATCGCC CGCGCAAAGG ACGGCAGCTA TTTCGTCGGC
GAGGAATTCG GCCCCTACAT CCTGCACTTC GACAAGAACG GCACGCTGAT GGGCGACCCG
GTGCCGCATC CGTTCCTGCG CAGCCCGTCC AACCCGCTGG TGATGAACGA CGGCGCCACC
GCGACATCGC TCTCGAGCCG GGGCTTCGAG AGCCTGGCCT TCAACGGCGA CGGCAGCCGC
CTCTACGCAG TGCCCGAAGC AGCGCCCTCG CTGGCCTCGC TGCGGCCCGT GGCCGACGAC
GAGCGCTACC TGAACTTCTT CGAGTTCGAT CCCGCCTCCA TGCTCTACAC CGGCAAGAAC
CCGGTCTACA AGAAGGACGG TCCCGCCAAG GACAACCAGA TCGTGATCGG CGACATGACC
AACGTGGGCG GCAACAAGTT CGTGCTGATC GAGCGCGACA GCCTGTTCGG CGCCAAGGCC
GTGGTCAAGC GCCTGTACAT GGTCGACCTC GACGTGAAGG ATGCCGACGG CGTGCTCAAG
AAGACGCTGC TGGTCGACCT GCTGAACATC TCCGACCCGG CGGACATCGG TGGCCCGCTG
GCCGGCGTGG TGGCCGGCAA GTTCAGCATG CCTTTCGATT CGATCGAGAG CGTCGAGGTG
GTGGACGACC ACACGCTGGC CGTTGCGATC GACACCAACT TTCCGACCGA AGACGGCCGC
GTCCCCGGCA AGCCGGACGA CACGGAAATC ATCACGATCC GCTTCGACCA GGCGCTGTTC
AAGCGCGCCG CTTCCAGGAC CTGA
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| Protein sequence | MSIRFASSRL PRHLMLAVVS SAALAACGGG NGGGIAFPPL VGAPAPAPAP APAPAPQPPQ
DDGAGLPHKL TGWASLADTF RWPGPTTGQF ITAALGVAPP FVDAQPVPGF SALLKNDDGT
WTAMPDNGYG SKSNSGDFVV GFYNVSIDFR TVANGTTVPG TVKVNSRVNF NDANGFLKDG
KGVDLKITAD FANYQTVSGN NLVDSGKPVD PRIVGGRLLT GFDLDVESIA RAKDGSYFVG
EEFGPYILHF DKNGTLMGDP VPHPFLRSPS NPLVMNDGAT ATSLSSRGFE SLAFNGDGSR
LYAVPEAAPS LASLRPVADD ERYLNFFEFD PASMLYTGKN PVYKKDGPAK DNQIVIGDMT
NVGGNKFVLI ERDSLFGAKA VVKRLYMVDL DVKDADGVLK KTLLVDLLNI SDPADIGGPL
AGVVAGKFSM PFDSIESVEV VDDHTLAVAI DTNFPTEDGR VPGKPDDTEI ITIRFDQALF
KRAASRT
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