| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4435 |
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| Symbol | |
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| ID | 7974109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4675223 |
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| End bp | 4675924 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795024 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_002946312 |
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| Protein GI | 239817402 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAACA AGATCGCGCG CTCGGTCGCC GATGCCCTGG CAGGCATCCC AGACGGCGCC
ACGGTTCTCA TCGGCGGTTT CGGCACCGCC GGCATTCCCG GCGAACTCAT CGACGGCCTC
GTCGAGCAGG GCGCCAAGGA CCTCACCGTC GTCAACAACA ATGCCGGCAA CGGCGAAACC
GGCCTGGCCG CGCTGCTCAA GGCCGGCCGC GTGCGCAAGA TCATCTGCAG CTTTCCGCGC
CAGGCCGACA GCCAGGTGTT CGACGGGCTC TACCGCAGCG GCAAGATCGA ACTCGAACTG
GTGCCCCAGG GCAACCTGGC CGAGCGCATC CGCGCCGCGG GTGCCGGCAT CGGCGCCTTC
TTCTGCCCCA CGGGCTACGG CACGCAGCTC GCGGGCAACC GCGAAACCCG CGAGATCGAC
GGCAAGCAGT ACGTGCTCGA ATACCCGATC CACGGCGACG TGGCCCTCAT CAAGGCCGAG
CGCGGCGACC GCTGGGGCAA CCTGGTCTAC CGCAAGGCCG CGCGCAACTT CGGCCCGGTG
ATGGCCATGG CCGCGAAGAA GACCATTGCC ACCGTGCACG ACATCGCCGA GCTCGGCACC
CTCGACCCCG AGACCGTCGT GACCCCGGGC ATCTTCGTGC ACCAGGTGGT GCGCATCGAA
CGCGTGGCCA CCCAGGCCGG CGGTTTCAAG AAGGCAGCAT GA
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| Protein sequence | MINKIARSVA DALAGIPDGA TVLIGGFGTA GIPGELIDGL VEQGAKDLTV VNNNAGNGET
GLAALLKAGR VRKIICSFPR QADSQVFDGL YRSGKIELEL VPQGNLAERI RAAGAGIGAF
FCPTGYGTQL AGNRETREID GKQYVLEYPI HGDVALIKAE RGDRWGNLVY RKAARNFGPV
MAMAAKKTIA TVHDIAELGT LDPETVVTPG IFVHQVVRIE RVATQAGGFK KAA
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