| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4427 |
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| Symbol | |
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| ID | 7974101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4668730 |
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| End bp | 4670106 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795016 |
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| Product | histidine kinase |
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| Protein accession | YP_002946304 |
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| Protein GI | 239817394 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACTC CCGCGAATCC TCCCGCGAAC CCGGCCGGCG CTGCGCGCGG CTGGCGCCGG
CTGCTGCCCG GCTCGCTGTT CTCCCGCGTG ACGCTGATCA TCGTGGTGGG CCTGGCGATT
GCGCAGCTGC TCACCTTCGC GGCGATCCGC TACGAGCGGA ACATGGCGCT GCGCGAGCTG
ATGATGATCG GCATCGAGCG CGACATCGCG AGCTCGGTCG CCATCCTCGA CCGCCTGCCC
GCGGCCGAGC GCGCCGGCTG GCTCGACCGG CTGGAGCGGC GCAACTACCG CTTCGTGCTG
GGCGGCAGTG CAGAGGGCAC CGAGCCCGGC TCGCTGCAGT CGCGGCAGTT TGCCGCGGCC
ATCGTCGATG CGATGCGCCC GTTCCAGGTC GTCAAGGTCG GCGAGGTGGC CTGGCCGCCC
GAGGGCCTGC AGATCCAGGT GCGCCTGGGC GACGGGTCTT CCGTGGTCGT CCATGCAATG
CGCGTGGGCA TGCCGGTGTC GGGCTGGGTG ATGTGGCTGC TTGCGGCCCA GCTGGTGGTG
CTGGCCGTGT GCGCCTGGTA TGCGGTGCGG CTGGTGACGC GGCCGCTCGC GCAGCTTTCC
GAGGCGGCCG ACCGGCTCGG GCCCGACCTC AAGGGCCGCA CGCTCGCGGA AGAGGGTCCC
ACCGAAGTGG CGCACGCGGC GCGCGCCTTC AACGCCATGC AGCAGCGCAT TGCGGGCTAC
ATGTCCGAGC GCGTCGAGAT CCTCGCGGCC ATCTCGCACG ACCTGCAGAC GCCCATCACG
CGGATGCGGC TGCGCACCGA CCTGATGGAC GACGCGCACG ACCGCGAGAA ATTCCGCCAG
GACCTCGACG CCATGCACTC GCTGGTGCGC GAAGGCGTGA CCTATGCGCG CACGCTCCAC
GGCGCCGCGG AGCCGCCGCT GCGCATCGAT GCCGATGCAC TGCTCGAAAG CATGGTGGCC
GACTACGAAG ACGTGGGCCA GCAGGTGCGG CTCGAAGGCA AGGCCGGCGC GCCGATCGTG
AGCCGCCCGC ATGCGCTGCG CCGCATCCTG ATGAACCTGA TCGACAACGC GCTCAAGTTC
GGGAGCGAGG TGCGCCTGCG CGTGCATGCC GAAGAAGACG GCCGGCTGGT GCTGAGCGTG
CTCGACAACG GCCCCGGCAT TCCGCCGGAC GAGCTCGACG CCGTGCTCAA GCCCTTCTAC
CGCGTCGAGA GTTCGCGCAA CCGCAGCACC GGCGGCACCG GGCTGGGCCT GGCCATTGCG
CACCAGCTGG CCATGGCCAT GGGCGCCGAG CTCGCGCTGA AGAACCGCCC CGAAGGCGGG
CTCGAGGCCC GGCTTGCGCT GGCCGCCGCG CCGGCACGCA CCAACCTCCA AGGCTGA
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| Protein sequence | MSTPANPPAN PAGAARGWRR LLPGSLFSRV TLIIVVGLAI AQLLTFAAIR YERNMALREL
MMIGIERDIA SSVAILDRLP AAERAGWLDR LERRNYRFVL GGSAEGTEPG SLQSRQFAAA
IVDAMRPFQV VKVGEVAWPP EGLQIQVRLG DGSSVVVHAM RVGMPVSGWV MWLLAAQLVV
LAVCAWYAVR LVTRPLAQLS EAADRLGPDL KGRTLAEEGP TEVAHAARAF NAMQQRIAGY
MSERVEILAA ISHDLQTPIT RMRLRTDLMD DAHDREKFRQ DLDAMHSLVR EGVTYARTLH
GAAEPPLRID ADALLESMVA DYEDVGQQVR LEGKAGAPIV SRPHALRRIL MNLIDNALKF
GSEVRLRVHA EEDGRLVLSV LDNGPGIPPD ELDAVLKPFY RVESSRNRST GGTGLGLAIA
HQLAMAMGAE LALKNRPEGG LEARLALAAA PARTNLQG
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