| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4421 |
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| Symbol | |
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| ID | 7974095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4660796 |
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| End bp | 4662019 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795010 |
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| Product | protein of unknown function UPF0027 |
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| Protein accession | YP_002946298 |
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| Protein GI | 239817388 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1690] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA ACTACAAACT GCACGAAGTC GCCAACGGCG TCCCCGTGAA GATGTGGACG
AACGGCGTGC CCGTGGAAAA CGAGGCGCAG AAGCAGCTCG AGAACGCGGC GCGCCTGCCC
ATCGTGTTCA AGCACATCGC GGCCATGCCG GACGTGCACT ACGGCATCGG CGCCACCGTG
GGCTCGGTGA TCCCGACCTT CAAGGCCATC ATCCCGGCCG CAGTGGGCGT GGACATCGGC
TGCGGAATGA TGGCGTGCAA GACCACGCTC AACGCGCGCG ACCTGCCCGA CAACCTGGGT
CCGCTGCGCT CGGCCATCGA AAAGGCCGTG CCGCACGGAA GCAACCCCAA GCGCATGGGC
CGCGACAAGG GGTCGTGGGA AACGCCGCCC GACGAAACCG ACGCCGCCTG GGCCCAGCTG
GTGGATGAGT TCGACCTGAT CTGCGAGGAC TACCCGCGCA TCAGGAACAC GAACAACCAC
AAGCACCTGG GAACGCTGGG TACCGGCAAC CACTTCATCG AGGTGTGCCT CGACGAAGCG
GGCGCCGTGT GGTTCATGCT GCATTCGGGT TCGCGTGGCG TGGGCAATGC CATCGGTACG
CACTTCATCG AGCTTGCGAA GAAGGACGCC GAACTGCACC AGCGCAACCT GCCCGACCAG
GACCTGGCGT ACTTCGAGGA AGGCGCCCAG TACTTCGGCG ACTATGTGCG CGCGGTGGGC
TGGGCCCAGA AGTTCGCGCG CGCCAACCGC GAGGTGATGA TGCAGCGCGT GGTCGCGGCT
GCGCGCAAGG TGATTGCCAA GCCTTTCGAG GCGCATGTGG AAGCGGTGAA CTGCCACCAC
AACTACGTGA GCCGCGAGAC GCACTTCGGC GAAGAGGTGC TCGTCACGCG CAAGGGCGCG
GTGAGCGCCA AGGCCGGCGA GCTCGGGATC ATTCCCGGCA GCATGGGCGC CAAGAGCTAT
ATCGTGCGCG GCAAGGGCAA CCCCGAGAGC TTCATGAGCT GCAGCCATGG CGCCGGTCGA
AAGATGAGCC GCACCAAGGC GAAGAAGCTC TTCACCATCG CCGACCAGAT CGCCGCGACC
GAAGGCGTGG AATGCCGCAA GGACGCCGAC GTGATCGACG AGATCCCGAT GGCCTACAAG
GACATCGACG CGGTGATGGA GGCGCAGAAG GACCTGGTGG AGGTGGTCTA CACGCTCAAG
CAGGTGGTGT GCGTGAAGGG ATAA
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| Protein sequence | MEQNYKLHEV ANGVPVKMWT NGVPVENEAQ KQLENAARLP IVFKHIAAMP DVHYGIGATV
GSVIPTFKAI IPAAVGVDIG CGMMACKTTL NARDLPDNLG PLRSAIEKAV PHGSNPKRMG
RDKGSWETPP DETDAAWAQL VDEFDLICED YPRIRNTNNH KHLGTLGTGN HFIEVCLDEA
GAVWFMLHSG SRGVGNAIGT HFIELAKKDA ELHQRNLPDQ DLAYFEEGAQ YFGDYVRAVG
WAQKFARANR EVMMQRVVAA ARKVIAKPFE AHVEAVNCHH NYVSRETHFG EEVLVTRKGA
VSAKAGELGI IPGSMGAKSY IVRGKGNPES FMSCSHGAGR KMSRTKAKKL FTIADQIAAT
EGVECRKDAD VIDEIPMAYK DIDAVMEAQK DLVEVVYTLK QVVCVKG
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