| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4401 |
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| Symbol | |
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| ID | 7974075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4643250 |
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| End bp | 4644116 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794990 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002946278 |
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| Protein GI | 239817368 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.400198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCACC AGAACCTGAT CGCCATCGAC ATCCACACCC ACGCCGAAGT GAGCTGCTGG
AACCCCTTCG ACAACTACGG CGAGGAATAC GACCGCGCCG CCGACAAGTA CTTCGGCTCC
AGCGGCCGGC CCACCATTGC CGAGAGCGTG GCCTACTACC GTGAACGCAG GATCGGGCTG
GTGATGTTCA TGGTCGATGC CGAATCGAAC ATGGGCCGCC GCCGCATCCC GAACGAGGAA
ATCGCCGAAG CCGCGCAGAA GAACAGCGAC ATGATGATCG CCTTCGCGAG CATCGATCCG
CACAAGGGCA AGATGGGCGC GCGCGAGGCG CGGCGCCTGA TTGAAGAGCA CGGCGTGAAG
GGCTTCAAGT TCCACCCGAC GGTGCAGGCC TTCCACCCCT ACGACAAGAT GGCCTGGCCG
CTGTACGAGG TGATTGCCGA GCACAAGCTG CCGGCCATCT TCCACACCGG CCACAGCGGC
ATCGGCTCGG GCATGCGCTG CGGCGGGGGC CTCAGGCTGG AGTACAGCAA CCCGATGCAC
CTGGACGACG TGGCCATCGA CTTTCCCGAC ATGCAGATCG TGATGGCGCA CCCCAGCTTT
CCCTGGCAGG ACGAGGCGCT GAGCGTGGCC ACGCACAAGC CGAACGTCTG GATCGACCTT
TCGGGCTGGA GCCCCAAGTA TTTTCCGAAG CAGCTGGTGC AGTACGCCAA CACGCTGCTG
AAGGACCGCA TCCTGTTCGG CAGCGACTAT CCGCTGATCA CGCCCGACCG CTGGATGAAG
GACTTCGAGG CGGCCGGCTT CAAGCCCGAG GTGATGCCGG GCATCCTGAA GGGCAATGCG
GTCAGGCTGC TGAAGCTGGA GGGCTGA
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| Protein sequence | MDHQNLIAID IHTHAEVSCW NPFDNYGEEY DRAADKYFGS SGRPTIAESV AYYRERRIGL
VMFMVDAESN MGRRRIPNEE IAEAAQKNSD MMIAFASIDP HKGKMGAREA RRLIEEHGVK
GFKFHPTVQA FHPYDKMAWP LYEVIAEHKL PAIFHTGHSG IGSGMRCGGG LRLEYSNPMH
LDDVAIDFPD MQIVMAHPSF PWQDEALSVA THKPNVWIDL SGWSPKYFPK QLVQYANTLL
KDRILFGSDY PLITPDRWMK DFEAAGFKPE VMPGILKGNA VRLLKLEG
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