Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4400 |
Symbol | |
ID | 7974074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4641372 |
End bp | 4643222 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794989 |
Product | potassium efflux system protein |
Protein accession | YP_002946277 |
Protein GI | 239817367 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.199549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACACG CACCCGCCTG GCTGACCAAC AGCCTGATCT ACCTGGGCGC CGCCGTGCTG GTGGTGCCGC TGTCCAAGGC GCTGGGCCTG GGCTCCATCA TCGGCTACCT CGTGGCCGGC ATCGCGATCG GCCCGTGGGG GCTCGGGCTC GTCTCCAGCG TGGAGGACGT GCTGCATTTC GCCGAATTCG GCGTGGTGCT GATGCTGTTC CTCGTGGGCC TGGAGCTCGA ACCCAAGCGC CTGTGGAACC TGCGCCGGCC GATCTTCGGC TGGGGCACCG CGCAGGTGCT GAGCTGCGCC GCGGTGCTGT TTGCCGTCGG CTTTGCCGCG GGCGTGGCGT GGCGGGTGGC GCTGGTGGCG GCGCTCGGCC TGGCGCTGTC TTCCACCGCC ATCGCGCTGC AGGTGCTGGG CGAACGCAAC CTGCTGAAGA CCCCGAGCGG CCAGGCGGGC TTCTCGATCC TGCTGTTCCA GGACGTGGCA GCCATTCCGA TCCTCGCGCT GCTGCCGCTC TTGGCCGGCG CCACGGCGGC CGAGCAGTCG CTCAGCGGGC TGGACCGCAC GCTCGAGGGC CTGAAGATCG TCGGCGTGAT CGCCGGCATC ATCCTCGGCG GCCGGTTGGC CCTGCGTCCG CTGCTGCGCT GGATCGCGCG CAGCAACACG CCCGAGATCT TCACCGCCGC GGCGCTGCTC CTGGTGGTGG CCATCGCCGC GCTGATGCAG TTCGTGGGCC TGTCGATGGC GCTGGGCGCC TTCCTTGCCG GCGTGCTGCT GGCCGAGAGC GAATACCGGC GCGAGCTCGA GACCGACATC GAGCCCTTCA AGGGCCTGCT GCTGGGCCTG TTCTTCATTG CCGTGGGCAT GTCGATCAAC TTCGGCGTGC TGATCGCGAG CCCGGGGCTG ATGGCGCTGC TGGTGGTCGG CTTCATGGCC ATCAAGCTGG CCGTGATCTA CGCGCTGGCC AAGGCCATGG GCCTGGCCTA CCAGGAGCGG CCGGTGTTCA CGCTGCTGCT GGCGCAGGGC GGCGAGTTCG CGTTCGTGGT GTTCCAGGCC GCGGGCCCCG ACGTACTGCC GCCCGAGACC ACCTCGCTCC TGATCGGCGC GGTGGCGCTG TCGATGCTGC TGTCGCCGCT CCTGCTGGTG CTGCTCGACA AGTTCGTGCT GCCGCGCTAC AGCCGCAGCA ACGGCACGCA GCTGGAAGAA ATTTCGGAGC AGCAGGACGC CAAGGTGCTG ATCTGCGGCT TCGGGCGCTA CGGCCAGATC GTGGGCCGCA TGCTGATATC GCAGGGCCTG CGCGTGACGG TGCTCGACCA CGACGCCGAC ACCGTGGAGG GCCTGCGCCA GTTCGGCTTT CGCGTGTTCT ACGGCGACGC GACGCGGCTG GACCTGCTGC GCACCGCGGG CGCCGGCACG GCCAAGGCCA TCGTGGTGGC GGTGGACGAC ATCGAGCAGT CGCTGGAGAT CGTCGATCTC GTGAAGGAGC ACTTTCCGAA GGCCCGCATC ATCGCGCGGG CGCGCAACGT GAACCACCTG TTCCAGCTGC GCGACCGCGG CGTGACGGAC GTGGAGCGCG AAGTGTTCGA GTCGTCACTG CGCAGCGCGC GCACCGCGCT CGAGGCGCTG GGCTGGCCGG CGCACGAGGC GCGCGAATCG GCCATGCGCT TTCGCCGCCG GAACCTCAAG CTCAGCGACG AGATGTACCC GCACTACAAG GACCGCGCCC AGCTGATCGC GGCCAGCAAG GCCGGCCGCC AGCAGTTCGA GGAACAGATG GCGCGCGAAC GCGAGGAACG GCAGCGCCGC TCGGGCCTCG ACTGGGACCT GATCGAGGAA AAGGAAGAGG CGGACGCGTA G
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Protein sequence | MEHAPAWLTN SLIYLGAAVL VVPLSKALGL GSIIGYLVAG IAIGPWGLGL VSSVEDVLHF AEFGVVLMLF LVGLELEPKR LWNLRRPIFG WGTAQVLSCA AVLFAVGFAA GVAWRVALVA ALGLALSSTA IALQVLGERN LLKTPSGQAG FSILLFQDVA AIPILALLPL LAGATAAEQS LSGLDRTLEG LKIVGVIAGI ILGGRLALRP LLRWIARSNT PEIFTAAALL LVVAIAALMQ FVGLSMALGA FLAGVLLAES EYRRELETDI EPFKGLLLGL FFIAVGMSIN FGVLIASPGL MALLVVGFMA IKLAVIYALA KAMGLAYQER PVFTLLLAQG GEFAFVVFQA AGPDVLPPET TSLLIGAVAL SMLLSPLLLV LLDKFVLPRY SRSNGTQLEE ISEQQDAKVL ICGFGRYGQI VGRMLISQGL RVTVLDHDAD TVEGLRQFGF RVFYGDATRL DLLRTAGAGT AKAIVVAVDD IEQSLEIVDL VKEHFPKARI IARARNVNHL FQLRDRGVTD VEREVFESSL RSARTALEAL GWPAHEARES AMRFRRRNLK LSDEMYPHYK DRAQLIAASK AGRQQFEEQM AREREERQRR SGLDWDLIEE KEEADA
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