Gene Vapar_4398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4398 
Symbol 
ID7974072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4639961 
End bp4640581 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID644794987 
ProductCobyrinic acid ac-diamide synthase 
Protein accessionYP_002946275 
Protein GI239817365 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.230089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTGG TTCTGGTCGC CAATCCCAAG GGTGGCGTGG GCAAATCGAC GCTCGCAACC 
AACATTGCGG GCTACTTTGC GAGCCGCGGC CATGCGGTGA TGCTGGGCGA CGTGGACCGC
CAGCAGTCCT CGCGCCTCTG GCTGGGCCTG CGCCCGCCGC AGGCGCGGGC CATCGCCACC
TGGGAAGCCA CCGGCGACAG CGCCGTGGTG CGGCCGCCGC GCGGCACCAC GCATGCGGTG
CTCGACACCC CCGCCGGCCT GCACGGCTGG CGCTTCAAGG AGGTGCTGGC GTTGGCCGAC
CGGGTGATCG TGCCGCTGCA GCCGAGCATC TTCGACATCT ACGCCACGCG CGATTTCCTC
GACCGGCTGA AGGAGCAGCG CCGCGCCGAA AAGACGAAGA TCAGCCTCGT GGGCATGCGC
GTGAACGCCC GCACCCTGGC GGCCGACCGG CTGCACGAGT TCATCGCCAG CCTTGGCGTG
CCGGTGCTGG GCGAACTGCG CGACACCCAG AACTACGTGC AGCTCGCGGC GCGCGGGCTC
ACGCTGTTCG ACATCGCGCC GGGCCGGGTG CAGCGCGACC TGGCGCAGTG GCGGCCGATC
TGCGACTGGC TCGAAGGCTG A
 
Protein sequence
MPVVLVANPK GGVGKSTLAT NIAGYFASRG HAVMLGDVDR QQSSRLWLGL RPPQARAIAT 
WEATGDSAVV RPPRGTTHAV LDTPAGLHGW RFKEVLALAD RVIVPLQPSI FDIYATRDFL
DRLKEQRRAE KTKISLVGMR VNARTLAADR LHEFIASLGV PVLGELRDTQ NYVQLAARGL
TLFDIAPGRV QRDLAQWRPI CDWLEG