Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4392 |
Symbol | |
ID | 7974066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4635410 |
End bp | 4636588 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644794981 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_002946269 |
Protein GI | 239817359 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGAGCA TTTGGCGCAA TAAGTACAGG CCGGCGAATC TGTTGCTGGC GGCCGGCGCG GCTTTCAGCG GCGCGGCGCA CGCAGTCAAC GATCTGCCCG GCGGCCCCTC GGTGCGCCAG CTGAATCTTC CGCTGGGCGT CACCAAGATT GCGCAGGAAC AGCATTTCCT GCACACGGTG ATGATGATCC TGTGCACGGT CATCTTCGTT GCCGTGTTCG CGGTCATGTT CTATTCGATA TGGAAGCACC GCAAGTCGGT CGGCCACAAG GCGGCCAACT TCCATGAATC GGTGGTGGTC GAGGTCATCT GGACCATCGT GCCCTTCATC ATCGTGATCG TGATGGCGCT GCCCGCCACC AAGGTGCTGG TGGCCCAGAA GGACACCACC AACGCCGACC TCACCATCAA GACCACCGGC TACCAGTGGA AGTGGGGCTA CGACTACCTG AACGGCGAAG GCGAGGGCCT GGCCTTCATC TCCACGCTCG ACAGCTCGCA GCGCGCCATG TCCGACGCCG GTGCCAAGGG CGCCATGCCC GACGACTACC TCTTCAAGGT CGACAACCCG ATGGTGGTGC CGGTCCAGAA GAAGGTGCGC ATCATCACCA CCGCCAACGA CGTGATCCAC GCGTTTGCCG TGCCCCAGCT GGGCATCAAG CAGGATGCGG TTCCCGGCTT CGTGCGCGAT ACCTGGTTCC GCGCCGAGAC CGTGGGCGAC TACTACGGCC AGTGCCAGGA ACTCTGCGGC AAGGAACACG CCTACATGCC GATCCACGTG AAGGTGGTCT CGGCCGCCGA CTACACGGCC TGGGTCGATG GCAAGCGCAA GGAAGCCGCG GCCAAGCTCG ACGATCCGAG CAAGGTCTGG ACCCTGCCCG ACATGTTGGC GCGCGGCGAG AAGGTCTATG CCGCCAACTG CGCGGCCTGC CACCAGGCCA ACGGCAAGGG CGCCGGCCCG ATCAAGCCGC TGGACGCCAG CCCCAAGGTG CTCGACACCG ACCACAAGGT GCAGCTCACG GTGCTGCTCA ACGGCCAGAA CAATGGCGCG ATGCCCTCCT GGAAGCAGCT GAGCGACACC GACCTCGCGG CCGTTGCCAC CTACACCAAG AACAGCTGGT CGAACAAGAC GGGCCAGCTG GTGCAGCCGG CCGAAGTTCT GGCCCTGCGC GGCAAGTGA
|
Protein sequence | MKSIWRNKYR PANLLLAAGA AFSGAAHAVN DLPGGPSVRQ LNLPLGVTKI AQEQHFLHTV MMILCTVIFV AVFAVMFYSI WKHRKSVGHK AANFHESVVV EVIWTIVPFI IVIVMALPAT KVLVAQKDTT NADLTIKTTG YQWKWGYDYL NGEGEGLAFI STLDSSQRAM SDAGAKGAMP DDYLFKVDNP MVVPVQKKVR IITTANDVIH AFAVPQLGIK QDAVPGFVRD TWFRAETVGD YYGQCQELCG KEHAYMPIHV KVVSAADYTA WVDGKRKEAA AKLDDPSKVW TLPDMLARGE KVYAANCAAC HQANGKGAGP IKPLDASPKV LDTDHKVQLT VLLNGQNNGA MPSWKQLSDT DLAAVATYTK NSWSNKTGQL VQPAEVLALR GK
|
| |