| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4385 |
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| Symbol | |
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| ID | 7974059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4630629 |
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| End bp | 4631363 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794974 |
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| Product | putative transmembrane cytochrome oxidase |
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| Protein accession | YP_002946262 |
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| Protein GI | 239817352 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3346] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGCCC TTTGCGCCAC GGTGTCGCTG GGCCGCTGGC AGCTGTCGCG CGCCGCGCAG
AAGGAGGCGC TGCAGGCCGA GATCGAGGCC CAGAAGCAGA AGCCGCCGCT GGCCCAGGCC
GAGTTCCTGG CGCTCGAGGC GCCGGCCGGC GAGCTGCACC GGCCGGTGCG GCTGCGCGGC
CTCTGGCTGA CGCCCCAGAC GGTCTACCTG GACAACCGGC AGATGCATGG CGTGCCGGGC
TTCTACGTGC TGACGCCGTT CGCCCTGGAA GGCAGCGACC AGGCCGTGAT GATCCAGCGC
GGCTGGGTGC AGCGCAACTT CAACGACCGC ACGCAGCTGG GCGCGGTCGA GACGCCGCCG
GGCATCGTCG AGGTCACGGG CCTGATCGAG CCGCCGCCGG GCCATTTGTT CGAGCTCGGC
AAGCCGGCCG CGGCCGCCTC GGCACCGGAA TCCGCGGGGT CTTCGCCCAT CCGGCAGAAT
CTCGACCTGG AAGCGTTCCG CGCCGAAACC AAGCTGCCGC TGCGAACCGA TGTGTCGCTG
CAGCAGGCCG GCCCCGCTTC CGAGGGGTTG CAGCGCGACT GGCCGGCCCC CGCTCTGGGT
CTGGAGAAGC ACTACGGCTA TGCATTCCAG TGGTTCGGGC TTTCGGCCCT CGTGGTCATC
CTCTATGTCT GGTTCCAAAT CATTTCCCCC TACCGCCGCT CGAGGCGCCG CGCACGCGAT
GAACGCAGCC TCTGA
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| Protein sequence | MLALCATVSL GRWQLSRAAQ KEALQAEIEA QKQKPPLAQA EFLALEAPAG ELHRPVRLRG
LWLTPQTVYL DNRQMHGVPG FYVLTPFALE GSDQAVMIQR GWVQRNFNDR TQLGAVETPP
GIVEVTGLIE PPPGHLFELG KPAAAASAPE SAGSSPIRQN LDLEAFRAET KLPLRTDVSL
QQAGPASEGL QRDWPAPALG LEKHYGYAFQ WFGLSALVVI LYVWFQIISP YRRSRRRARD
ERSL
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