Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4384 |
Symbol | |
ID | 7974058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4629962 |
End bp | 4630645 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644794973 |
Product | hypothetical protein |
Protein accession | YP_002946261 |
Protein GI | 239817351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.82671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAG CCTCTGACGA ACCGCTGGGC CTGACGGTGC ACTCGATGCC GTCGCCCAAC CAGGCGCTCG ACGGTGCCGA GGGCCGCCGC ACGGTGGCCG GGCGCTGGAA GATGATTGCC GTGATGCTGA TGTGCGCCGC GCCCGTCATC GCGTCGTACT TCACCTACTA CGTGATCCGG CCCGAGGGGC GCAGCGTCTA CGGCGAGCTC ATCGATCCGC AGCGCACGCT GCCTGTGCTC GCCACCACGG ACCGCAGCGG CGCGCCGGTC GACCTGGCCA CGCTCAAGGG CCAGTGGCTG CTGGTGGCGG TGGCCGATGC GGCCTGCGAC GCGCTCTGCG AACAGCAGCT CTACCTGCAG CGCCAGCTGC GCGAGAGCCT GGGCCGCGAG AAGGACCGGC TCGACCGCGT CTGGCTCGTG AGCGATGCGG CGCCGGTTCC GGCGCGGCTG GACAACGGCC TGCGCGGCGC CACCGTGCTG CGCGTGCCGG CCCAGCAATT GGCCCAATGG CTCGCGCCCG CCCCGGGCCA TGGGTTGGCC GAGCACCTGT ACGTGGTCGA TCCGATGGGC AACTGGATGA TGCGATTTCC GGCCCGCATG GACGCCGCGG GCGCGAGCCG CGCCAAGCGC GACCTCGACC GCCTGCTGCG CGCCTCCGCC TCCTGGGACG AGCCCGGCCG CTAG
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Protein sequence | MNAASDEPLG LTVHSMPSPN QALDGAEGRR TVAGRWKMIA VMLMCAAPVI ASYFTYYVIR PEGRSVYGEL IDPQRTLPVL ATTDRSGAPV DLATLKGQWL LVAVADAACD ALCEQQLYLQ RQLRESLGRE KDRLDRVWLV SDAAPVPARL DNGLRGATVL RVPAQQLAQW LAPAPGHGLA EHLYVVDPMG NWMMRFPARM DAAGASRAKR DLDRLLRASA SWDEPGR
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