Gene Vapar_4384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4384 
Symbol 
ID7974058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4629962 
End bp4630645 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID644794973 
Producthypothetical protein 
Protein accessionYP_002946261 
Protein GI239817351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.82671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAG CCTCTGACGA ACCGCTGGGC CTGACGGTGC ACTCGATGCC GTCGCCCAAC 
CAGGCGCTCG ACGGTGCCGA GGGCCGCCGC ACGGTGGCCG GGCGCTGGAA GATGATTGCC
GTGATGCTGA TGTGCGCCGC GCCCGTCATC GCGTCGTACT TCACCTACTA CGTGATCCGG
CCCGAGGGGC GCAGCGTCTA CGGCGAGCTC ATCGATCCGC AGCGCACGCT GCCTGTGCTC
GCCACCACGG ACCGCAGCGG CGCGCCGGTC GACCTGGCCA CGCTCAAGGG CCAGTGGCTG
CTGGTGGCGG TGGCCGATGC GGCCTGCGAC GCGCTCTGCG AACAGCAGCT CTACCTGCAG
CGCCAGCTGC GCGAGAGCCT GGGCCGCGAG AAGGACCGGC TCGACCGCGT CTGGCTCGTG
AGCGATGCGG CGCCGGTTCC GGCGCGGCTG GACAACGGCC TGCGCGGCGC CACCGTGCTG
CGCGTGCCGG CCCAGCAATT GGCCCAATGG CTCGCGCCCG CCCCGGGCCA TGGGTTGGCC
GAGCACCTGT ACGTGGTCGA TCCGATGGGC AACTGGATGA TGCGATTTCC GGCCCGCATG
GACGCCGCGG GCGCGAGCCG CGCCAAGCGC GACCTCGACC GCCTGCTGCG CGCCTCCGCC
TCCTGGGACG AGCCCGGCCG CTAG
 
Protein sequence
MNAASDEPLG LTVHSMPSPN QALDGAEGRR TVAGRWKMIA VMLMCAAPVI ASYFTYYVIR 
PEGRSVYGEL IDPQRTLPVL ATTDRSGAPV DLATLKGQWL LVAVADAACD ALCEQQLYLQ
RQLRESLGRE KDRLDRVWLV SDAAPVPARL DNGLRGATVL RVPAQQLAQW LAPAPGHGLA
EHLYVVDPMG NWMMRFPARM DAAGASRAKR DLDRLLRASA SWDEPGR