| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4381 |
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| Symbol | |
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| ID | 7974055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4627195 |
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| End bp | 4627824 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794970 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_002946258 |
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| Protein GI | 239817348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.558879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGTGC CCATGAACAA GCGAAATGCC CTGAAACTGA TTGCCGGCGG TGCGGGATGG
GCTGGCATGG CCGCCACCCT GGGCCTCGGT CTTTCGGCCT GCAGCGAAGC CAAGCCCAGC
TTCAATGCGG TCGACATCAC CGGCGCGGAC TATGCCCGCG ACTTCTCGCT CAAGGATGCC
GACGGCAAGC TGCGCACGCT GGCCGACTTC AAGGGCAAGG TGGTCGTGCT GTTCTTCGGC
TACGCGCAGT GCCCCGACGT CTGCCCCACC ACCATGACCG AGATGGCGCA GGTCAAGCAG
CAGCTCGGCA GCGACGGCGA CAAGCTGCAG GTGCTGTTCG TCACGGTCGA TCCGGCGCGC
GACACGCCCG AGGTGCTCAA GGCCTACATG GGCGCGTTCG ACCCGGGCTT CGTCGCGCTG
ATTCCCACGG CCGACCAGCT CGCCCAGGTC GCCAAGGACT TCAAGGTCTA CTTCAAGAAG
GTCGAGGGCA AGACTCCCAC GAGCTACTCG ATGGACCATT CGGCCGCCAG CTTCGTCTAC
GACACCGACG GCCGGCTGCG GCTCTACGCG CGCTATGGCG CCGGCGTGGC GCCCATGGTG
TCGGACGTGA AGGCGCTGCT CAAGTCCTGA
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| Protein sequence | MPVPMNKRNA LKLIAGGAGW AGMAATLGLG LSACSEAKPS FNAVDITGAD YARDFSLKDA
DGKLRTLADF KGKVVVLFFG YAQCPDVCPT TMTEMAQVKQ QLGSDGDKLQ VLFVTVDPAR
DTPEVLKAYM GAFDPGFVAL IPTADQLAQV AKDFKVYFKK VEGKTPTSYS MDHSAASFVY
DTDGRLRLYA RYGAGVAPMV SDVKALLKS
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