| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4378 |
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| Symbol | |
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| ID | 7974052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4624744 |
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| End bp | 4625208 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644794967 |
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| Product | protein of unknown function DUF962 |
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| Protein accession | YP_002946255 |
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| Protein GI | 239817345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4539] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.227882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGCACA CCGCCGATGC CCCGCTGGCA GCGGGCGAGC GCAAGGTCGA CCGGCTGCTG
GCCCACTATG GCGAAAGCCA CCGCCATCCG ACCAACGAGC TGATTCACTT CGCCGCGATC
CCGGCCATCA TGCTGAGCCT GGTCGGCCTG CTGTTTGCGC TGCACCCGTG GGCGGCCTAC
TTCTTCGTGG CGGCCAGCCT GGTCTACTAC GCCACATTGC GCTCCCCCAC GTTCCTGCTC
ACCATGCTGG CTGGCACGGC CCTGCTGCTG GCGCTGGTCC ATGCGATGGG GAGCCTTGTA
CTGCCGGTTT CCGCCGCCAT CTTCGTGGTG GCGTGGATCT TCCAGTTCAT CGGCCACAAG
ATCGAAGGCA GGAAACCTTC TTTCTTCGAA GACATCCAAT ATCTTTGGGT GGGGCCGCTG
TTCGTACTTT CGAAGCTGTT TTTGCGCCTC GGTATCCGCT GGTGA
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| Protein sequence | MMHTADAPLA AGERKVDRLL AHYGESHRHP TNELIHFAAI PAIMLSLVGL LFALHPWAAY
FFVAASLVYY ATLRSPTFLL TMLAGTALLL ALVHAMGSLV LPVSAAIFVV AWIFQFIGHK
IEGRKPSFFE DIQYLWVGPL FVLSKLFLRL GIRW
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