| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4376 |
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| Symbol | |
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| ID | 7974050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4622071 |
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| End bp | 4623852 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794965 |
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| Product | histidine kinase |
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| Protein accession | YP_002946253 |
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| Protein GI | 239817343 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.904194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACA CGCCGCTGAA CCAGCGCGTG CTGCGCGAGC ACGTGGCGTC GGTCTATTTC
AACTACAACG CCACCTTCCT GGCCCGCGTC GTCTTCGTGC TGGTGCTCGG TGCGTTCATG
TACCTGCAGC TGGGCGACCC GATGGTGCTG CCCTTCGTCG TGCTGCACCT GACGCTGTAC
CTGGGCATGT ACTTCACGCC GCGCTGGAAT CCGTCGGTCC CGGCGGCGGA CAGCGCCTGG
TGGGCGCGCA GGATCACCCG CATCGTGACC CTGCTGGGGT TTGCCGATGC GCTGGCGCCG
TGGATCTTCG TGCCCGCGGG CAACCTGCCG GTCACCGCCG CGCTGATGGT GGTGATGATG
GGCAACTGCG CCCGGGCCGT GCAGTCGCTG CGGCCGCTCC AGGCAGCGCT GTTCGGCCAC
ACGCTGCCCA TGATGGGCGG GCTGATCGTT GCGCTGGCGT GGCAGCGCGA CTCCATCCAT
CTCTTTCTCG CGGCCTTCGC CTCGATCTAC CTGTTTCTCA TGCTGCGCGT CGGCGTGCAG
GAGCACAGGC TGCTGGCGGA TTCGCTGGTC CTGCGCTTCG AGAAGGAAGC CCTGGCCGTG
CGGCTGGAAG AGCAGATTGC CGCCACCGAG CGCGCCAGCC AGGAAAAGAC CCGCTTCCTG
GCCAGCGCCA GCCATGACCT GCGCCAGCCG CTGCATGCCA TTGCGCTGTT CGGCGCCGCG
CTCGAGAACG AGTTGCGCGG CCGTCCGGAG GAGCTCAACG CGCAGCGCCT GATGCGCGCC
GTCAATGCCC TGGGCGCCTC GCTCGACATC ATGCTGGACA TCTCGCGGCT GGACGCCGGC
GTGGTCACGC CCGTGCGCCA GGCCGTCCAG CTCGATGCCC TGTTCCTGCC GCTCAACCAC
ACCTTCTCGG CCCAGGCCGA GCAAAAGCAG CTGCAGCTGC GTGTGCGCGC CAGCGGGCTG
TGGGTGCGCA GCGACCCCCA GCTGCTGCAC CGGATGCTGT CCAACCTGCT GGACAACGCC
CTCAAGTACA CCGCGCGCGG CGGAGTGACC GTGACGGCCC GCGAGCGCGG GGAGTTCGTG
TGGATCGAGG TGCGCGACAC CGGCATCGGC ATTGCGCCCG AGCAGTCGAG CCGGATCTTC
GAGGAGTTCT ACCAGGTCGA CAATCCGGGG CGCGACCGCT CGCGCGGGCT GGGCATCGGC
CTGTCGATCG TGCAGCGGCT CTCGCACCTG CTCGGCCATC CGGTGCAGAT GCATTCGCGG
CTCGCGCGCG GCACCCATTT CCGCGTCGTG CTGCCGGCCG TCGCGCCGCA GGCGGGCGCG
CTGGCCGGAC CTTTCCCGGC CGACGCTGCG GCGTCGCAGC AGCAGGAACG CCGGCCCAGG
CGAGCGGCCC CGGCACTGCC CGCGCGGGTG CTGCTGCTGG ACGACGAATC CGAAATCCGC
GAAGCCATGA CGGGCCTGCT GCGCTCGCAT TCGATCGACG CGCTCGCCGT CGCGGACGAA
GCCGCCGCTG CCGCCGCCTT GCAGCAGGCG AGCAGCGAAA GGCGGCCTTT CGACCTGCTG
ATGTGCGACT ACCGGCTGGC CGATGGCATC GATGGGCTGG ACGTGGGCCT GCGCCTGAGC
GGCCGGCGGC AGGGCGGGCC CACGATTCCC TTGCTGCTGA TCACCGGCGA GACCTCTCCC
GACAGGCTGC AGCGCGTGCG GGAATCCGGG ATTCCGGTGC TGTTCAAGCC GGTGGCCGCC
GATTCGCTGT TCCGGATGAT GGCCCGAGCG GCAAGCGCTT AG
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| Protein sequence | MADTPLNQRV LREHVASVYF NYNATFLARV VFVLVLGAFM YLQLGDPMVL PFVVLHLTLY
LGMYFTPRWN PSVPAADSAW WARRITRIVT LLGFADALAP WIFVPAGNLP VTAALMVVMM
GNCARAVQSL RPLQAALFGH TLPMMGGLIV ALAWQRDSIH LFLAAFASIY LFLMLRVGVQ
EHRLLADSLV LRFEKEALAV RLEEQIAATE RASQEKTRFL ASASHDLRQP LHAIALFGAA
LENELRGRPE ELNAQRLMRA VNALGASLDI MLDISRLDAG VVTPVRQAVQ LDALFLPLNH
TFSAQAEQKQ LQLRVRASGL WVRSDPQLLH RMLSNLLDNA LKYTARGGVT VTARERGEFV
WIEVRDTGIG IAPEQSSRIF EEFYQVDNPG RDRSRGLGIG LSIVQRLSHL LGHPVQMHSR
LARGTHFRVV LPAVAPQAGA LAGPFPADAA ASQQQERRPR RAAPALPARV LLLDDESEIR
EAMTGLLRSH SIDALAVADE AAAAAALQQA SSERRPFDLL MCDYRLADGI DGLDVGLRLS
GRRQGGPTIP LLLITGETSP DRLQRVRESG IPVLFKPVAA DSLFRMMARA ASA
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