| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4373 |
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| Symbol | |
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| ID | 7974047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4618098 |
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| End bp | 4619519 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794962 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_002946250 |
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| Protein GI | 239817340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCTTT GCGCGCTGTG GGCCATGCCT GCGCAGGCCC AGCCCACACC GGTTCCCGCC
GCCCCTTCCA CCGCCGCTCC CTCCGACGCT GCCGCCGCGG CCGCATCCGC ACCCCGGCAA
TTCACCCTGG CCAACGGCAT GACGCTGCTG GTGCAGCCCG ACCGGCGCGC GCCCACCGCG
GTGCAGATGC TCTGGGTGCG CGTGGGCTCG GTGGACGAGG TCGACGGCAC CTCGGGCGTG
GCCCACGTGC TCGAACACAT GATGTTCAAG GGCACCAAGG ACATCAAGCC CGGCGAGTTC
TCGCGCCGCG TGGCGGCGCT GGGCGGCCAG GAGAACGCCT TCACCACGCG CGACTACACG
GGCTACTACC AGCAGATTCC CGTGGCCAGC CTGGAGCAGG TCATGAAACT CGAATCGGAC
CGCTTCGCCA ACAACCAGTG GTCCGACGAC GAGTTCAAGC GCGAGATCGA GGTGGTCAAG
GAGGAACGGC GGCTGCGCAC CGAAGACCAG CCGCGCGCAT TGCTCGGCGA GCAGCAGAAC
GCGGCCGTGT TCACGGCCTC GCCCTACCAC CGCCCCGTGG TCGGCTGGAT GAGCGACCTC
GACGCGATGA CGCCCGACGA CGCGCGCGCT TTCTTCCGCC ACTGGTACGT GCCCGCCAAT
GCCGCCGTGG TGGTGGTGGG CGATGTCGAC GTGGCCCAGG TGCGTGCGCT GGCCGAGAAG
TACTACGGCA GCATTCCCGC GCGCGCCGTG CCCGCGCGCA AGCCGCGCAC CGAGCCCGTG
CAGCGCGGCA TCCGCCGCAT CGAGTTCAAG GCGCCGGCCG AGCAGGCCTA TGTGTCGCTC
GCGTTCCGCA TTCCGCAGCT GGAAAGCATC GATGCCGCGG ACAGCGACGT GTGGGCGCTC
GAAGTGCTGT CGGCCGTGCT CGACGGCTAC ACGGGCGCGC GGCTCGACCG TGCGCTGACC
CAGGGCCCCG ACCGCGTGGC CGATTCGGCC AGCGCCTACT CGGGCCTGGC CGGCCGCGGG
CCGCAGCTGT TCACGCTGGT GGGCGTGCCG GCCCACGGCA AGAGCGCCGA AGCGGTGGAG
GCGGCGCTGC GCGCCCAGGT GGCGCGCGTC GCGAAGGAGG GCGTGAGCGA AGCCGAACTC
GCGCGCGTCA AGACACAGTG GGTGGCCAGC GAAACCTACA AGCGCGACTC CGTGATGGCG
CAGGCCCGCG AGCTCGGCAG CAACTGGGTG CAGGGACTGC CGCTGGACAC CAGCGCGCGC
ATCGTCGCGA AGCTGCAGGC CGTGACGCCG GCCCAGGTGC AGGCCGTGGC CGCCAAGTAC
TTCGGCGACG ACCAGCTCAC AGTGGCCACG CTGCGCCCCT TGCCGCTCGA AGCCAGGCCG
CGCGGCCGCG GTTTTGCCGC CCCGCAGGGC GAACTGCGCT GA
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| Protein sequence | MALCALWAMP AQAQPTPVPA APSTAAPSDA AAAAASAPRQ FTLANGMTLL VQPDRRAPTA
VQMLWVRVGS VDEVDGTSGV AHVLEHMMFK GTKDIKPGEF SRRVAALGGQ ENAFTTRDYT
GYYQQIPVAS LEQVMKLESD RFANNQWSDD EFKREIEVVK EERRLRTEDQ PRALLGEQQN
AAVFTASPYH RPVVGWMSDL DAMTPDDARA FFRHWYVPAN AAVVVVGDVD VAQVRALAEK
YYGSIPARAV PARKPRTEPV QRGIRRIEFK APAEQAYVSL AFRIPQLESI DAADSDVWAL
EVLSAVLDGY TGARLDRALT QGPDRVADSA SAYSGLAGRG PQLFTLVGVP AHGKSAEAVE
AALRAQVARV AKEGVSEAEL ARVKTQWVAS ETYKRDSVMA QARELGSNWV QGLPLDTSAR
IVAKLQAVTP AQVQAVAAKY FGDDQLTVAT LRPLPLEARP RGRGFAAPQG ELR
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