| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4370 |
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| Symbol | |
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| ID | 7974044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4615088 |
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| End bp | 4615723 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794959 |
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| Product | Lysine exporter protein (LYSE/YGGA) |
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| Protein accession | YP_002946247 |
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| Protein GI | 239817337 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1279] Lysine efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATCG AACAAATCTC TGCCGCATTC GTCAACGGGT TCCTGATGAG CCTGGTGCTC
ATCGTCGCCA TCGGCGCGCA GAACGCCTAT GTGCTGCGCC AGGGGCTGCG GCGCGAGCAT
GTGAGCGCCG TGGTGCTGTT CTGTGCGGCG AGCGATGCCC TCCTGATCAC CGCCGGCGTG
GCTGGCATGG CGCAGGCGCT GAAAGGGCGG CCGGCGGTGG CCACCGCGCT CGCCGGCCTC
GGCGCGCTGT TCCTGGGTGC CTACGGGCTG CGCGCGCTGT GGCGTGCCCG GCAGCCCGGC
GCACTGCAGG CAAAGGCGCA GGGCGTGTCG CTCTCGCGCA CCGCGGTGCT GGCGCAGGCG
GCGGGCTTCA CCCTGCTGAA CCCGCATGTC TATCTCGACA CCGTGCTGCT CGTGGGCAGC
ACCGGCGCCC AGTACGGCGG CGCGCTCAAG GCCTGGTTCG TCGCCGGGTC GGCGATCGCG
AGCGCGCTGT GGTTCTCGGC GCTGGGCTTC GGTGCGCGCT GGCTGGCGCC GGTGTTTGCG
CGGCCGCGCG CCTGGCAGAT GCTCGACGCG CTGATCGGCG GCACGATGCT GCTGCTTGCC
GCGTTGCTGG CGCGGCGGGC CTTGCTCGGG GCCTGA
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| Protein sequence | MVIEQISAAF VNGFLMSLVL IVAIGAQNAY VLRQGLRREH VSAVVLFCAA SDALLITAGV
AGMAQALKGR PAVATALAGL GALFLGAYGL RALWRARQPG ALQAKAQGVS LSRTAVLAQA
AGFTLLNPHV YLDTVLLVGS TGAQYGGALK AWFVAGSAIA SALWFSALGF GARWLAPVFA
RPRAWQMLDA LIGGTMLLLA ALLARRALLG A
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