Gene Vapar_4369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4369 
Symbol 
ID7974043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4614398 
End bp4615060 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID644794958 
Productmethyltransferase 
Protein accessionYP_002946246 
Protein GI239817336 
COG category[L] Replication, recombination and repair 
COG ID[COG0742] N6-adenine-specific methylase 
TIGRFAM ID[TIGR00095] RNA methyltransferase, RsmD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAGA AGAAAGCCGC AGCCGCCAGG CGCTCCCCCT CGACACCACC GCCACCGCCG 
CGATCGAAAT CGCTGCCGCA CGAAGTGCGC ATCATCGGCG GCCAATGGAA GCGCAGCCGC 
CTTCCGGTGG CCGACAAGCC GGGCCTGCGC CCCACGCCCG ACCGCGTGCG CGAGACGCTG 
TTCAACTGGC TCGCGAGCAT CGCGGGCGCC GGCGGCGGCG AACTGCCAGG CTGGCATTGC 
ATCGATGCCT TCGCGGGCAC CGGCGCGCTC GGCCTGGAGG CCGCGTCGCG CGGTGCCGCG 
AGCGTGCTGC TCTGCGAACA GGACGCCGCG CTGGCGGCCC AGTTGCAGGC CGCCAAGGCC 
AAGCTCTCGG CCGAGGCCGT GCGCATCGAG CGCGGCAGCG GGCTCACTGC GCTCGAGCGT 
GCGCCCGCGG GCAGCCTGGA TGCGGTCTTT CTCGATCCGC CTTTCGAGAG CATCGCCCTC 
TACGAACCCG CGCTGCGGGC CGCCGCGCGC GCCATGAAAA GCGGGGGTGC CGTCTACCTG 
GAGGCACCGC GCCGCTGGAG CGACGAGGAG CTGGCCGCGC TCGGCCTTGT TGGTTTTCGT 
TACCTCAAGG CAGGGGCGGT GCACGCTCAC TTGCTGCGGC AGGCCGCGAA CGGGACTGCA 
TAA
 
Protein sequence
MPQKKAAAAR RSPSTPPPPP RSKSLPHEVR IIGGQWKRSR LPVADKPGLR PTPDRVRETL 
FNWLASIAGA GGGELPGWHC IDAFAGTGAL GLEAASRGAA SVLLCEQDAA LAAQLQAAKA 
KLSAEAVRIE RGSGLTALER APAGSLDAVF LDPPFESIAL YEPALRAAAR AMKSGGAVYL 
EAPRRWSDEE LAALGLVGFR YLKAGAVHAH LLRQAANGTA