Gene Vapar_4366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4366 
Symbol 
ID7973308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4612198 
End bp4613196 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content74% 
IMG OID644794955 
Producturea amidolyase related protein 
Protein accessionYP_002946243 
Protein GI239817333 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCTGG TGCACAAGCC CGGCATGCTG GCCTCGGTGC AGGACCTGGG GCGGCACGGG 
CACCGCCAGC TCGGCATCTG CCCCGGCGGC GCGCTCGACG TGCTGGCGCT CACACTGGCG
AACCGGCTGG TCGGCAATGC CGACGGTGCA GCCGGCCTCG AGCTCACCAT GGGCGGCTGC
GAGATCCGCT TCGAGACGGC CACGCGCATC GCGCTGGTGG GCGACGGCTT CGGCGCCCGG
CTCGACGGCG CGCCGCTCTG GCCCTGCTGG AGCGTGCCTG TCGCGGCGGG GCAAACGCTC
AAGCTCGCGG GCGCCAACGC GGCCGGCGCC AAGAAGGCCG GCTTGCGCAG CTGGCTCGCG
GTGGCGGGCG GCATCGACGT GCCGCCGGTG CTCGGCTCGC GCAGCACCGA CCTCAAGGCC
GGCTTCGGCG GCCACCAGGG GCGCGCATTG CGCAAGGGCG ACCGGCTTCC GCTGGGCGCC
ACGGCGCTCG ATGCCGCCCG GCTCGCGCGG CGCCCGTTCG GCCTGCGCGG TCCGGACTGG
GGCCCCGAGG AAAGCGATTC GGCCATCGCC CTGCGCGTCT TGCCCGGCCC CGAATTCGAC
CAGTTCACCG TGGCCTCGCA GGCGCTGCTG TGGAGCGAGC GCTGGCGCAT CACCGCGCAG
AGCAACCGCA TGGGAAGCCG GCTCGCGGGC GCCGAGCTCA AGCGCCGGCG CAGTGCCGAC
ATGCTCTCGT CGGGCGTCAT TCCCGGCACG ATCCAGGTGC CGCCCTCGGG CCAGCCGATC
ATCCTGATGG GCGACGCGCA GACCACCGGC GGCTATCCGC GCATCGGCGT GGTGATCCGC
GCCGACCTGT GGAAGCTCGC GCAGGCGCCG CTGGACGGCC GGCTGCGGCT GGTGCAGGTC
GACATGGCCG CGGCGCTCGA GGCCTGGGCC GGGCAGCAGC GCTATCTTGC GCAGGTCGCG
CAAGGGCTGG CGGCAGCGGG CTGGACGAGA CCGGCATAG
 
Protein sequence
MMLVHKPGML ASVQDLGRHG HRQLGICPGG ALDVLALTLA NRLVGNADGA AGLELTMGGC 
EIRFETATRI ALVGDGFGAR LDGAPLWPCW SVPVAAGQTL KLAGANAAGA KKAGLRSWLA
VAGGIDVPPV LGSRSTDLKA GFGGHQGRAL RKGDRLPLGA TALDAARLAR RPFGLRGPDW
GPEESDSAIA LRVLPGPEFD QFTVASQALL WSERWRITAQ SNRMGSRLAG AELKRRRSAD
MLSSGVIPGT IQVPPSGQPI ILMGDAQTTG GYPRIGVVIR ADLWKLAQAP LDGRLRLVQV
DMAAALEAWA GQQRYLAQVA QGLAAAGWTR PA