Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4365 |
Symbol | |
ID | 7970556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4611387 |
End bp | 4612127 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794954 |
Product | LamB/YcsF family protein |
Protein accession | YP_002946242 |
Protein GI | 239817332 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCG ACCTGAATGC CGACCTCGGC GAAGGCGCCG GCAGCGACGA AGCGCTGCTC GGCCTCGTGA GCTCGGCCAA CATCGCCTGC GGCTGGCATG CGGGCGACGC CAAGACCATG CGGCAGTGCG TGCGCTGGGC CATCGCGCAC GGCGTGGCCA TCGGCGCCCA TCCGAGCTTT CCGGACCGCG AGAACTTCGG CCGCAGCACC ATGCATCTGC CGCCCGACGA GATCGTGGCC AACGTGCTCT ACCAGGTCGG CGCGCTGGCC GCGATCGCCA AGGCCGAGGG CGGCCAGCTC TCGCACGTGA AGGCGCACGG CCAGCTCTAC AACCAAGCCG TGAAGGAGCC CGAACTCGCC GACGCGCTCT GCGAAGCGGT GCGGCGCTTC GATCCCTCGC TCCGCTTCTT CGGCCTTGCG GGCAGCGGCA TGATCGACGC CGCGCGCCGT GCCGGCCTCA CGCCGGTCGA AGAGGTTTTT GCCGACCGCG GCTACATGCC CGACGGCAGC CTGGTGCCGC GCAGCCAGCC CGGCGCGCTG ATCGAGGACG AGGAGCAGTC CCTCGCCCAG ACGCTCTCGC TGGTGCGCGA CCGCAAGGTG AAGGCGATCG ACGGCAGCAT CGTGCCGGTC AATGCCCAGA CCGTGTGCCT GCATGGCGAT GGCGCCCACG CGCTGGCCTT TGCGCGCCGC ATTCGCGAGC GCCTGCAGCA AGAGGGCATC GCGGTTCGCG CGATGGCCTG A
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Protein sequence | MQIDLNADLG EGAGSDEALL GLVSSANIAC GWHAGDAKTM RQCVRWAIAH GVAIGAHPSF PDRENFGRST MHLPPDEIVA NVLYQVGALA AIAKAEGGQL SHVKAHGQLY NQAVKEPELA DALCEAVRRF DPSLRFFGLA GSGMIDAARR AGLTPVEEVF ADRGYMPDGS LVPRSQPGAL IEDEEQSLAQ TLSLVRDRKV KAIDGSIVPV NAQTVCLHGD GAHALAFARR IRERLQQEGI AVRAMA
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