Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4356 |
Symbol | |
ID | 7970547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4602352 |
End bp | 4603770 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644794945 |
Product | amidase |
Protein accession | YP_002946233 |
Protein GI | 239817323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0637971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCCG ACGTGTCATC TTCTTCTTCG CTGAACGAGC TTTCCGCCCA GGAACTCTCC GCCGCCTACC GCGACAGGCG CCTGTCGCCT GTCGAAGTCA CGCAAGCCGT CATCGCGCAG ATCGAGCGCT GCGAGCCCAA GCTGCAGGCC ACCTGGCTCT TCAGGCCCGA AGCCGCGCTG GAACAGGCGC GCGCTTCGGA AGCACGCTGG CAGCGCGGCG ACGCGCTCGG CCCGCTCGAC GGCGTGCCGG CCACCATCAA GGAGAACATC GCGACCCGCG GCGATCCGAT GCCGGCCGGC ACGGCCGCCG TCGACCTGAA GCCCGCGGCC GCCGATGCAC CGCCCGCCGC GCGCCTGAAG GAAGCCGGCG CGGTGATCGT GAGCAAGACC ACCATGCCGG ACTACGGCAT GCTGTCTTCG GGGCTCTCGA GCTTTCACAC GCTGGCGCGC AACCCCTGGG ACCTGAGCCG GACCCCCGGC GGCTCGAGCG CGGGCGCGGG TGCGGCGGCC GCCGCGGGCT ACGGCCCGCT GCACATCGGC ACCGACATCG GCGGGTCGCT GCGGCTGCCC GCGAGCTGGT GCGGCATCTT CACGCTCAAG CCGAGCCTGG GCCGCATCCC GATCGACCCG CCCTACATGG GCCGCGCGGC CGGCCCGATG ACGCGCAGCG TGGGCGATGC GGCGCTGATG ATGCAGGTGC TTTCAAAGCC CGATGCGCGC GACAGCATGA GCCTGCCGCC GCAGGACATC GCGTGGGAGA GCTTCGACGT ATCGCCCGAC CATCTGCGCG GCTTGCGCAT CGGCCTGCTG CTGGACGCGG GTTGCGGCCT CGCGGTCGAG CCCGAGATCC AGGCGGCGGT CGAGCATGCA GCGCGCCTGT TCGAAAAGGC CGGCGCCATC GTCGAACCCA TGCAGCCGTT CATGTCGCAA GCCATGCTCG ACGGCATGGA CCACCTGTGG CGCATGCGAT CGCTGGTGGA CATGAAGGCG CTGCGCCCCG ACCAGCGCGC CAAGGTGCTG CCCTACATCC GCGAGTGGGC CGAGAGCGCG GCCGAGTTCA GCGGCGAGCA TGTGTTCCGC GGCTTCAGCC AGTTCCATGC AACGCGCGTG GCCACGGTGC AGGCCTGCGC GCGCTTCGAC TACGTGATCT CGCCGGTGTC GCCGAACATG CCGGCGGCCG CGGAGGCGCC GTCCCCGACC AACGATCCGC TGCGGCCGCT GGAGCACATC GGATTCACGG TGCCGTTCAA CATGTCGGAG CAGCCGGCGT CGTCGGTGAA CTGCGGGTAC TCGGCGAGCG GGCTGCCGAT CGGGCTGCAG ATCGCCGGGC AGCGCTTCGA CGACCTCGGC GTGCTGCGCG TGTCGCGTGC GTTCGAGCAG ATTCGGGAGC CGCAGCGGCC CTGGCCTGTG ACGCCTTGA
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Protein sequence | MSADVSSSSS LNELSAQELS AAYRDRRLSP VEVTQAVIAQ IERCEPKLQA TWLFRPEAAL EQARASEARW QRGDALGPLD GVPATIKENI ATRGDPMPAG TAAVDLKPAA ADAPPAARLK EAGAVIVSKT TMPDYGMLSS GLSSFHTLAR NPWDLSRTPG GSSAGAGAAA AAGYGPLHIG TDIGGSLRLP ASWCGIFTLK PSLGRIPIDP PYMGRAAGPM TRSVGDAALM MQVLSKPDAR DSMSLPPQDI AWESFDVSPD HLRGLRIGLL LDAGCGLAVE PEIQAAVEHA ARLFEKAGAI VEPMQPFMSQ AMLDGMDHLW RMRSLVDMKA LRPDQRAKVL PYIREWAESA AEFSGEHVFR GFSQFHATRV ATVQACARFD YVISPVSPNM PAAAEAPSPT NDPLRPLEHI GFTVPFNMSE QPASSVNCGY SASGLPIGLQ IAGQRFDDLG VLRVSRAFEQ IREPQRPWPV TP
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