| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4353 |
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| Symbol | |
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| ID | 7970544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4598230 |
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| End bp | 4599060 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794942 |
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| Product | ABC transporter related |
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| Protein accession | YP_002946230 |
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| Protein GI | 239817320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.762556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAC CCGCCAGCAC GCAGCCCCTG CTCGAGGTGA CGGACCTCGT GCGCCACTAC
GCGCTGCCGC GCGAAAAGCT CTTCGGGCCG CCGCCGCTCG TGAAAGCGCT CAACGGCGTG
AGCTTCAGCG TCGCGGCCGG ACGCAGCCTG GGCATCGTCG GTGAATCGGG CTCGGGCAAG
TCGACCATCG CGCGCCTGGT GATGGCGCTC GACACGCCCA CCTCGGGCAG CGTGCGCATG
CTGGGCCGCG ACCTGCACCG GCTGCCCAAG GGCGAGCTGC GCGCGGCGCG GCGCGATTTC
CAGATGGTGT TCCAGGACCC GTATGGCTCG CTCGATCCAC GCCAGACGGT GGCGCGCATC
GTCGCCGAAC CGCTCGAAGC GCTGGCCGAA ACCAGCCGCG CGATTCAGCG CGAGCGCGCC
TCCGAGGCGC TGGCCGCCGT GGGCCTGCGC ACCACCGACA TGGACAAGTA CCCACACGAA
TTCTCGGGCG GGCAGCGCCA GCGCATCGCG ATCGCGCGCG CGCTCATCAC GCGGCCCAAG
CTCATCGTGG CCGACGAGCC CGTGAGCGCG CTCGACGTGT CGGTGCAGGC GCAGGTGCTC
AATCTCATGC AGGACCTGCA GCAGCAGTTC GGCGTGAGCT ACCTGCTCAT CAGCCACGAC
CTCGCGGTGG TGAACCACCT GTGCGACGAG GTCTGCGTGG TGTGGAAAGG CAAGATCGTC
GAGCAGGGCC CGCCCGGCGA GCTCTTTCGC AATGCGCAGC ATCCCTACAC GCGCACGCTG
CTCGACGCGG TGCCGCGCAC GCCCGCCGGG GGCACGCTGC TGGCGGCCTG A
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| Protein sequence | MNQPASTQPL LEVTDLVRHY ALPREKLFGP PPLVKALNGV SFSVAAGRSL GIVGESGSGK
STIARLVMAL DTPTSGSVRM LGRDLHRLPK GELRAARRDF QMVFQDPYGS LDPRQTVARI
VAEPLEALAE TSRAIQRERA SEALAAVGLR TTDMDKYPHE FSGGQRQRIA IARALITRPK
LIVADEPVSA LDVSVQAQVL NLMQDLQQQF GVSYLLISHD LAVVNHLCDE VCVVWKGKIV
EQGPPGELFR NAQHPYTRTL LDAVPRTPAG GTLLAA
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