Gene Vapar_4349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4349 
Symbol 
ID7970540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4595056 
End bp4595343 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content67% 
IMG OID644794938 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_002946226 
Protein GI239817316 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCG ACGAATGCAT CAACTGCGAT GTCTGCGAGC CCGAGTGCCC GAACGATGCG 
ATCTACATGG GCGCGGAGTT CTACGAGATC GACCCGCACA AGTGCACCGA ATGCGTCGGC
CACTTCGACG AGCCGCAGTG CGTGCAGGTG TGCCCGGTGG CGTGCATCCC GATCAACCCG
GCCCACGTGG AAAGCCGCGA GACGCTCTGG CAGAAGTTCG AGCGGCTCGC CGCGGCCAAG
GCAAAGGCCG CGGCTGCCGA GCCGCCCGCG CCCTCAGCCG GCGCTTGA
 
Protein sequence
MITDECINCD VCEPECPNDA IYMGAEFYEI DPHKCTECVG HFDEPQCVQV CPVACIPINP 
AHVESRETLW QKFERLAAAK AKAAAAEPPA PSAGA