| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4345 |
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| Symbol | |
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| ID | 7970536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4592076 |
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| End bp | 4593047 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794934 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_002946222 |
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| Protein GI | 239817312 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCTA ATCACCCTGA TTTCATGGTT TTCACCGGCA ATGCCAATCC TGGCCTTGCC
GCAGAAATCG CGCAGAACCT CGGGACCTCG CTGGGTGCCG CGCGCGTTGG ACGCTTCTCC
GACGGCGAAG TCACCGTCGA GATCAACCAG AACGTCCGGG CGCGCGATGT GTTCGTGGTG
CAGTCGACCT GCGCACCGAC CAACGAGAAC CTGATGGAAC TGCTGATCAT GGTCGACGCG
CTCAAGCGCG CCTCGGCCGA GCGGATCAGC GCGGTGATTC CCTACTACGG CTATGCCCGC
CAGGACCGCC GCCCGCGTTC GAGTCGCGTG CCGATCTCGG CCAAGGTGGT GGCCAACCTG
CTCGAAACCG TGGGCGTCGA GCGCGTGCTC ACGATGGACC TGCACGCCGA CCAGATCCAG
GGCTTCTTCG ACATTCCGGT CGACAACATC TATGCGTCGC CGGTGCTGCT GGGCGACCTG
CGCCAGAAGA ACTACGAAGA CCTGATCGTG GTCTCGCCCG ACGTCGGCGG CGTGGTGCGC
GCCCGCGCAC TGGCCAAGCA GCTGAACTGC GACCTCGCCA TCATCGACAA GCGCCGCCCC
AAGGCCAACG TGAGCGAGGT CATGAACGTG ATCGGCGAAA TCGACGGCCG CAACTGCGTG
ATCATGGACG ACATGATCGA CACCGCCGGC ACGCTGGTGA AGGCGGCCGA AGTGCTCAAG
GAGCGCGGTG CGAAAAGCGT CTACGCCTAT TGCACGCACC CGATCTTCTC GGGCCCGGCC
ATCGAGCGCA TCACCCACTC CGCGCTCGAC GAAGTGGTCG TGACCAACAC CATTCCCCTT
TCCGACGGCG CCCTGGCGTG CGGAAAGGTC CGCCAGCTCT CCGTGGCACC GCTGATCGCC
GAAACGATCC AGCGCATTGC CAAGGGCGAG TCGGTGATGA GTTTGTTCTC GGACCAGGAC
AACCTGTTCT GA
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| Protein sequence | MQANHPDFMV FTGNANPGLA AEIAQNLGTS LGAARVGRFS DGEVTVEINQ NVRARDVFVV
QSTCAPTNEN LMELLIMVDA LKRASAERIS AVIPYYGYAR QDRRPRSSRV PISAKVVANL
LETVGVERVL TMDLHADQIQ GFFDIPVDNI YASPVLLGDL RQKNYEDLIV VSPDVGGVVR
ARALAKQLNC DLAIIDKRRP KANVSEVMNV IGEIDGRNCV IMDDMIDTAG TLVKAAEVLK
ERGAKSVYAY CTHPIFSGPA IERITHSALD EVVVTNTIPL SDGALACGKV RQLSVAPLIA
ETIQRIAKGE SVMSLFSDQD NLF
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