| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4344 |
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| Symbol | ipk |
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| ID | 7970534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4590903 |
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| End bp | 4591793 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794932 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_002946221 |
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| Protein GI | 239817311 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.458506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCGA TCTACGACCT TCCCGCACCG GCCAAGCTCA ACCTCTTCCT GCACATCACC
GGCCGGCGCG AAGACGGCTA CCACCTGCTG CAGTCGGTCT TCATGCTGAT CGACTGGTGC
GACACGCTGC ACGTCGAACT GCGCAGCGAC GGCCAGCTCA GCCGCGAAGA CCTCACGACC
GAACTGCCGC CCGACGACCT CGTGCTGCGC GCGGCGCGGG CGCTGCAGGC GCATGCGGCG
CCCGGCCAGG GCGCCCACAT CGGCATCGCC AAGCAGGTGC CGGCGCAGGC CGGCATGGGC
GGCGGCTCCT CGGACGCCGC CACCTGCCTC CTGGCGCTGA ACCGCCTGTG GGGGCTGGAC
CTGCCGCTCT CGCGCCTGGC CGAGATCGGC GTGCAACTCG GCGCCGACGT GCCGTTCTTC
CTGGGCGGGC GCAATGCCTG GGTCGAGGGA ATCGGCGAGA AAATCAGGCC CGTGGACATC
CCTTCCGCAC GGTTCGTGGT GGCCAAGCCA CCCCAGGGAC TCGACACCAA GCTAATTTTT
TCTGCGCCCG ACCTTCAACG CGCCACTCCT GTTGCTATAA TCTCGGGCTT TGCTGCAGAT
AGCGAACAGC TTGAAGCCCC AAACCCCGAA AGCAGCGCTT TCAAGGTTTT CGACTTCGGC
CACAACGACC TGCAGCCGGT TGCCCAGCGG CTTTGCCCCG CGGTCACCGA CGCCATCGAA
TGGCTCGGCG CCCAAGGATT GAAAGCCCGG ATGACCGGCT CCGGAAGTTC GGTTTTCGCG
AAGATGCCGC AAGGGCCGCA GGAAGCGGAA CTGGCAAAAG CCCCACCGGG CTGGCAGGTT
CGCCAATGCA GCAACCTGGC CGTTCATCCA CTTTGGGGAT GGGCGACCTG A
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| Protein sequence | MKAIYDLPAP AKLNLFLHIT GRREDGYHLL QSVFMLIDWC DTLHVELRSD GQLSREDLTT
ELPPDDLVLR AARALQAHAA PGQGAHIGIA KQVPAQAGMG GGSSDAATCL LALNRLWGLD
LPLSRLAEIG VQLGADVPFF LGGRNAWVEG IGEKIRPVDI PSARFVVAKP PQGLDTKLIF
SAPDLQRATP VAIISGFAAD SEQLEAPNPE SSAFKVFDFG HNDLQPVAQR LCPAVTDAIE
WLGAQGLKAR MTGSGSSVFA KMPQGPQEAE LAKAPPGWQV RQCSNLAVHP LWGWAT
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