| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4341 |
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| Symbol | |
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| ID | 7970531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4587651 |
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| End bp | 4588463 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794929 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_002946218 |
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| Protein GI | 239817308 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0485295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC TTCCCGAAGT CGAAGTGACG CGGCGCGGTT TTGCCGAGCG CATTGCCGGT
GCACGCATCG ATGCGGTCCG CATCGGCAAA CCCTTGCGCT GGGCACTCAT GGTGATGCCC
GAGGCGCTGG TCGGGCGCCG CGTGCTGCAG GTGCGCCGGC GCGGAAAGTA CCTGCTGATC
GACCTGGACC GCGGCCTCCT GCTGCTGCAC CTGGGCATGT CGGGCAGCCT GCGCTTCGAT
GCGGCGCTGC CTGCGCCGGG CGTTCACGAC CACTTCGATC TGGTGACCGA ACTCGGCACG
CTGCGGCTGA ACGATCCGCG CCGCTTCGGC GCCGTGGTCT ACGTGGAGGA CGAGGCGGCG
CCCTGGGCCA TCAAGCTGCT CGGCGGCCTC GGCATGGAGC CGCTGGGCGA TGCTTTCGAC
CTGGACGCGT TCCACGCCGG CCTTCGCAAG CGCAAGGCGG CGGTGAAGCA GGTGCTGCTC
GCGGGTGATG TGGTGGTGGG CGTTGGAAAC ATCTATGCGT CGGAGGCCTT GTTCCTGGCC
GGCATCCGGC CCACGCTTTC GGCTGCGCGC ATCAGCCGGC CGAGGGCAGC CCGGCTCCAT
GCGGCCGTGC GCGAAATCCT GGCCAGGGCG GTCGAGAAGG GCGGCAGCAC GCTGCGCGAC
TTTTCCAACG TGGAGGGGCA GAGCGGCTAT TTCCAGCTCG AAGCCACGGT CTACGGCCGG
GCCGGCGAGC CCTGTCGGGT CTGCGCAACG CCGATCCGGC TGCTGCGCCA AGGGCAGCGT
TCCACTTACT ATTGCCCGAA TTGTCAAAAA TAG
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| Protein sequence | MPELPEVEVT RRGFAERIAG ARIDAVRIGK PLRWALMVMP EALVGRRVLQ VRRRGKYLLI
DLDRGLLLLH LGMSGSLRFD AALPAPGVHD HFDLVTELGT LRLNDPRRFG AVVYVEDEAA
PWAIKLLGGL GMEPLGDAFD LDAFHAGLRK RKAAVKQVLL AGDVVVGVGN IYASEALFLA
GIRPTLSAAR ISRPRAARLH AAVREILARA VEKGGSTLRD FSNVEGQSGY FQLEATVYGR
AGEPCRVCAT PIRLLRQGQR STYYCPNCQK
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