| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4335 |
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| Symbol | hrcA |
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| ID | 7970525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4580000 |
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| End bp | 4581010 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794923 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_002946212 |
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| Protein GI | 239817302 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACG ACCGTGCCAA GTTGCTCCTC AAGACGCTGG TCGAGCGTTA TATCGCTGAA
GGCCAACCGG TCGGGTCGCG GACTTTGTCG CGCGCCCCGG GCCTTGACCT GTCTCCCGCG
ACCATCCGAA ACGTCATGTC CGACCTCGAG GGTTTGGGGC TGATCACCAG CCCACACACC
TCGGCCGGAC GCATTCCCAC CGCGCGCGGC TACCGGCTGT TCGTCGACAC CATGCTCACC
GCCCAGCGCG AGCACATGAA CGCGCCGAGC CACCTGCCCC CTGACCAGCC GCAGAAGGTG
ATTGCCAACG CGGCCAACCT GCTGTCCAAC CTGTCGCAGT TCGTCGGCGT GGTCATGACG
CCGCGGCGCG CCTCGGTCTT CAAGCAGATC GAGTTCCTGC GGCTCTCGGA CCGGCGGCTG
CTGGTGATCA TCGTCTCGCC CGACGGCGAC GTGCAGAACC GCGTGATCTT TCCGGAGGCC
GACTACACGC AGTCCCAGCT GGTGGAAGCA TCGAACTACA TCAATGCCCA CTACGCGGGC
CTGACCATCG AGCAGGTGCG CGACCGCCTG CAGTCCGAGG TCGAAAAACT GCGCGGCGAA
ATTGCCGCGC TGATGCAGGC GGCGGTCAAG GTCAGTTCCG AGGTGCTCAC CGAGGCGCAG
GAAGACGACG TGGTGATCTC CGGCGAGCGC AACCTGCTTT CCGTCACCGA TTTTTCGAGC
GACATGGGGC AGCTGCGCCG TGCCTTCGAG CTGTTCGAGC AGAAGGCGCA GCTGATGCGG
CTGCTCGACG TGTCGAGCAA GGCAGAGGGC GTGCGCATCT TCATCGGCGG CGAAAGCCAG
GTGGTGCCGA TCGAGGAGCT TTCCATCGTC AGCGCCAACT ATGAAGTCGA CGGGCAGGTG
GTGGGCACGC TGGGCGTGAT CGGCCCGACC CGCATGCCGT ACGAGCGCAT GATCCAGATC
GTGGACATCA CCTCGCGGCT GGTCAGCAAT GCGCTGAGCC ACCGCAAGTA G
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| Protein sequence | MLDDRAKLLL KTLVERYIAE GQPVGSRTLS RAPGLDLSPA TIRNVMSDLE GLGLITSPHT
SAGRIPTARG YRLFVDTMLT AQREHMNAPS HLPPDQPQKV IANAANLLSN LSQFVGVVMT
PRRASVFKQI EFLRLSDRRL LVIIVSPDGD VQNRVIFPEA DYTQSQLVEA SNYINAHYAG
LTIEQVRDRL QSEVEKLRGE IAALMQAAVK VSSEVLTEAQ EDDVVISGER NLLSVTDFSS
DMGQLRRAFE LFEQKAQLMR LLDVSSKAEG VRIFIGGESQ VVPIEELSIV SANYEVDGQV
VGTLGVIGPT RMPYERMIQI VDITSRLVSN ALSHRK
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