| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4332 |
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| Symbol | |
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| ID | 7970520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4577196 |
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| End bp | 4577768 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794918 |
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| Product | transcription elongation factor GreB |
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| Protein accession | YP_002946209 |
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| Protein GI | 239817299 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01461] transcription elongation factor GreB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.313941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCAAAG CATTCACCAA GGAAACCGAG AGCGACGGTG ACGACGACGG CGGCGAAAGC
GCCGCGCCGG CGCTGCCGAG CGGCAGCAAG AACTACATGA CGCCGGCCGG CTATGCCCGC
CTGCGCGACG AACTGCTTCA GCTGATGGAC GAAGAGCGCC CGAAGGTCGT CGAGGCGGTG
CACTGGGCCG CCAAGAACGG CGACCGCTCC GAGAATGGCG ACTATCTCTA CGGCAAGAAG
CGGCTGCGGG AAATCGACCG GCGCATCCGC TTTCTCACCA AGCGGCTCGA AATTGCCGAA
GTGACCGATC CCTCGGTCCA TCACGGCAGC GACCAGGTGT TCTTTGGCGC AACGGTGCGC
TATGTGGACG AAACGGGCGA CGAGCGCAGC GTGACGATCC TGGGCATCGA CGAGGCGGAC
AGCGCCCAGT CGCAGGTCAG CTGGATCTCC CCGATTGCCC GCGCGCTGCT CAAGTCGCGC
GAAGGCGACG TGGTGAAGCT CGTGACGCCG GGCGGCGCCC ATGAAGTCGA GCTGCTGTCG
GTCAGCTATC CGGCGCCGGG CACGGCGCGC TAG
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| Protein sequence | MSKAFTKETE SDGDDDGGES AAPALPSGSK NYMTPAGYAR LRDELLQLMD EERPKVVEAV
HWAAKNGDRS ENGDYLYGKK RLREIDRRIR FLTKRLEIAE VTDPSVHHGS DQVFFGATVR
YVDETGDERS VTILGIDEAD SAQSQVSWIS PIARALLKSR EGDVVKLVTP GGAHEVELLS
VSYPAPGTAR
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