| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4325 |
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| Symbol | |
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| ID | 7970513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4570238 |
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| End bp | 4570969 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794911 |
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| Product | ribonuclease PH |
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| Protein accession | YP_002946202 |
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| Protein GI | 239817292 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTT TCACACGAAG CGGCGGCCGT GCCGCCGACC AGCTGCGCCC GGTGCGCATC
ACCCGCGGTT TCACCATCCA CGCCGAGGGT TCGGTGCTCA TCGAATTCGG CCAGACGCGC
GTGCTGTGCA CCGCCTCGGT CGAAGAGCGC GTGCCGCCGC ACAAGCGTGG CAGCGGTGAA
GGCTGGGTCA CGGCCGAATA CGGCATGCTG CCGCGCGCCA CCCACACGCG CAGCGACCGC
GAAGCCGCCC GCGGCAAGCA AAGCGGCCGT ACGCAGGAAA TCCAGCGCCT CATCGGCCGC
TCGATGCGCG CCGTGTTCGA CCTGGCTGCG CTGGGCGAGC GCACCATCCA CCTCGACTGC
GACGTGCTGC AGGCCGATGG CGGCACCCGC ACGGCGGCCA TCACCGGCGC CTTCGTCGCC
GCGCAGGACG CCGTCAACAA GCTGCTGGCC GCCGGCACCA TTCCCGCGTC GCCCATCAGG
GGCCATGTCG CGGCCATTTC GGTCGGCATC GTCGCCGGTA CGCCGCTGCT CGACCTCGAA
TACACCGAAG ACTCCGCCTG CGATACCGAC ATGAACGTCG TGATGACCGG CGCCGGCCAC
TTTGTCGAAG TGCAGGGCAC TGCCGAGGGT GCGGCCTTCT CGCGCGAGGA GATGAACCTG
CTGCTCGGCC TGGCCGAAAA GGGCATTGGC GAACTGATCG TGCTGCAGCA GCAGTCCCTC
GTTTCGAAGT GA
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| Protein sequence | MTAFTRSGGR AADQLRPVRI TRGFTIHAEG SVLIEFGQTR VLCTASVEER VPPHKRGSGE
GWVTAEYGML PRATHTRSDR EAARGKQSGR TQEIQRLIGR SMRAVFDLAA LGERTIHLDC
DVLQADGGTR TAAITGAFVA AQDAVNKLLA AGTIPASPIR GHVAAISVGI VAGTPLLDLE
YTEDSACDTD MNVVMTGAGH FVEVQGTAEG AAFSREEMNL LLGLAEKGIG ELIVLQQQSL
VSK
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