| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4324 |
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| Symbol | |
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| ID | 7970512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4569621 |
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| End bp | 4570226 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794910 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | YP_002946201 |
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| Protein GI | 239817291 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGATGA AACTGGTCCT GGCCTCCAAC AACGCCGGCA AGCTTGCCGA ACTCCAGCAA
CTGTTTGCGG AGCTGGCCGT GACGCTCGTG CCCCAATCGG CCTTGGGCGT GGGCGAGGCC
GAGGAGCCGT TTCGCACCTT CGTCGAAAAC GCGCTGGCCA AGGCGCGCCA TGCCAGCGCC
GCAACCGGCC TGCCGGCCAT TGCGGACGAC GCAGGGCTTT GCGTCGACGC CTTCGGCGGC
CTGCCGGGCG TGGACACGGC GTTCTATGCC ACGCAGTTCG GCTATGCCAA GGGCGACGCC
AACAACGTCA AGGCGCTGCT CGAGCAGCTC GACGGCGTGG TCAATCGGCG CGCCGCGCTC
GTCAGCACGT TGGTCGCGCT GCGCGGGCAC GACGATCCCG AGCCGCTCAT CGCGGTGGGC
CGCGTGGTGG GAGAAATCAC GAAGGCGCCG ATCGGTGACA ACGGCTTCGG CTTCGATCCC
GTCATGTACC TGCCCGGCTT CGGCAAGACC TTTGCCCAGC TGGCGCCCGA GGTGAAGAAC
GCCAACAGCC ACAGGGGCCA GGCGGCCAAG GCCATGCTGG CCCTGATGCG CGAACGCTGG
TTCTGA
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| Protein sequence | MAMKLVLASN NAGKLAELQQ LFAELAVTLV PQSALGVGEA EEPFRTFVEN ALAKARHASA
ATGLPAIADD AGLCVDAFGG LPGVDTAFYA TQFGYAKGDA NNVKALLEQL DGVVNRRAAL
VSTLVALRGH DDPEPLIAVG RVVGEITKAP IGDNGFGFDP VMYLPGFGKT FAQLAPEVKN
ANSHRGQAAK AMLALMRERW F
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