| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4303 |
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| Symbol | |
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| ID | 7970490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4546337 |
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| End bp | 4547215 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794889 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | YP_002946181 |
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| Protein GI | 239817271 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAG ATGGTAATAG AGTTTCAGGC AATGCGCGCT TGTTGCAATG GATCGGAAGC
ATCCAGGCCC GAACTGGCGA TCTCGCTGCC AGCGAGGCAA AGGTCGTCGA ACTGTTGCTC
GCCGATCCCT TGTTCGTGGG CGCGAGTACG ACCGCGCAGG TGGCTGCCCG TGCCGGCGTT
TCGCCGCCGA GCGTGATCCG CGCAGCGCGT GCGATCGGGT TCAGCGGTTT CACCGAACTG
AAGATCGAGA TCGCGCGTGC CCGCGGTACC ACCGGGTTCT TTGCGCCGCC TGGCGTGCTC
ACCGCGGGTG CGACGACTGC AGCGGTGCTC GAAGCCTCGA CCCGCGCAGG CACTGACGCA
CTGACTGCGC TCGGCGGAGC CCTGGAGCTG TCGGCGCTCG AGCGGGCGGT CAGCACCATC
GAGCAGGCGC GCCAGGTGAT CGCATTCGGA GCCGGCCCCT CGGCGACGGT CGCCGCAGAT
GCGGTCTTCC GACTGCGCGC GGTCGGCGTG ACGACCATCG GCATCGCGGA CCATCTGTCG
GCAATGATCG CGACACGGCT CCTGGGCCCC GGTGACGTCG TCATCGCCAT CAGTTCGACC
GGACGCACCT CGACGACCCT CGCCATCGCC GATGCGGCAT CTTCTGCCGG AGCCTCGCTC
ATCGCCATCA CCAACCAGTA CGGCACACCG CTGGCGACAC TCGCGAACAT CGCGCTTGTC
GTCGGCGGCG CGCCACTGAC GGCCCAGATG GCCGCGGCCG GGAGTCGGCT GGCGCAGCTC
GTGGTGATCG ACGCCCTGGT CGCGGCTGTC GCGCTGCGCG ACCCGCAGCG CAGCCGCCGC
GCCGAACGGG CGGGCATCGA CCTGCCCGAT ATCGCCTGA
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| Protein sequence | MKRDGNRVSG NARLLQWIGS IQARTGDLAA SEAKVVELLL ADPLFVGAST TAQVAARAGV
SPPSVIRAAR AIGFSGFTEL KIEIARARGT TGFFAPPGVL TAGATTAAVL EASTRAGTDA
LTALGGALEL SALERAVSTI EQARQVIAFG AGPSATVAAD AVFRLRAVGV TTIGIADHLS
AMIATRLLGP GDVVIAISST GRTSTTLAIA DAASSAGASL IAITNQYGTP LATLANIALV
VGGAPLTAQM AAAGSRLAQL VVIDALVAAV ALRDPQRSRR AERAGIDLPD IA
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