| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4302 |
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| Symbol | |
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| ID | 7970489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4545477 |
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| End bp | 4546337 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794888 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002946180 |
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| Protein GI | 239817270 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCCCG GCACCGTCGC GATGGTCCTC GCCGCGGCGG TCGCCCATGC GGTATGGAAC
CTGGCCTCGA AGTACAAGCG CGGTGATGCC GTCCTGTTCG TCTGCGCCTA CACCTACGCT
TCGGCGCTGC TGTGCATACC GATCAGCCTC GCCTTCATGG CGGATGGGCA GCAGGTGCCC
GGCTGGCAGC TCGCGGCGGG CGCCGCCGTC TCGGCCGTGT TGCACACCGC TTACTCCCTG
ACCTTGCAGG CCGGCTATGA ACGCGCCGAA CTGGGGGTGG TTTATCCGGT CGCCCGCGGC
ACCGGGCCGG TGCTGGCGAT GCTGTTCGCG ATCCTGCTCC TGGACGAACA GCTCACCGCT
GCCGCGATGT TCGGCGCTTC GCTTGTCGTG GCGGGCATTC TCGTCGTCAC CGGCAACCCG
TTCAGAAGCG CAAGCCGCCG GCCGCTTCAG GGCTTGCTCT GGGGCGCCGC GACGGGGGCG
ACCATCGCCG CCTACACCGT CTGGGACGGC TATTCGGTCG TCGCGCTGCA CCTGGCGCCT
GTGAGCTACT ACGCCGCCAC GCTGCTGCTG CAGAGCCTGA TCCTGACCCC CAGTTTGCTG
CGTCGGCGCC ATTGCATTCG AGCGGCCATC CGTGCCGACG CCGTGCCGAT CCTCATCGTG
GCTGTGTTCT CCCCGCTCGC CTACATCCTC GTTCTCACCG CCATGCTGAA GGCGCCGGTG
GCGCTCGTCG CGCCCCTGCG CGAGTCGTCC ATCGTCATCG GCTCACTCGT CGCGTGCAGA
CTGTTTGGCG AGGGTCATCT CGCGCGCCGC ATTGCCGGTG CGGTGATCGT GCTGGCGGGG
ATCGCGGCAA TCAGCCTTTG A
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| Protein sequence | MPPGTVAMVL AAAVAHAVWN LASKYKRGDA VLFVCAYTYA SALLCIPISL AFMADGQQVP
GWQLAAGAAV SAVLHTAYSL TLQAGYERAE LGVVYPVARG TGPVLAMLFA ILLLDEQLTA
AAMFGASLVV AGILVVTGNP FRSASRRPLQ GLLWGAATGA TIAAYTVWDG YSVVALHLAP
VSYYAATLLL QSLILTPSLL RRRHCIRAAI RADAVPILIV AVFSPLAYIL VLTAMLKAPV
ALVAPLRESS IVIGSLVACR LFGEGHLARR IAGAVIVLAG IAAISL
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