| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4300 |
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| Symbol | |
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| ID | 7970487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4543316 |
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| End bp | 4544557 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794886 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002946178 |
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| Protein GI | 239817268 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCCT CTCCTCATTC ACCTTCGGAA CTGCGGCAGC ATTGGCGCTA CGTCCTGGGT
TGCTTCCTCG GCTTGGCCAG TGGCGTCTCA TCCCTGTACT TCTACAGTTC AGGTCTGTTC
CTGAAGCCGC TCGCCGCCGA GTTCGGATGG ACCCGAGGCA CCGCGTCCCT GGGCTCGCTG
ATCAGCAGCG TGCTGCTCGG ATGCGCGGCG CCGTTCATCG GACAGGTGAT CGACCGGTAC
GGCGCGCGAC GCGTCACCCT GCTCTCCCTG GTGGGCCTGT CGACCTCGTT CCTGCTTCTG
GGCGTTTGGA CACAGGGGTT GGCCAGTTTT CTGGCGCTGG TCACGGTCCT GACACTGCTC
GGTGGCGCGA CCTCGCCCTT GTCCTTCACG AAGATCCTCG TGGGCAGGTT CTCTCGGCAA
CGCGGACTGG CCCTGGGCAT TGCCATCACC GGAACGGGCG TTGGGGCCAT CCTGATTCCG
CTGATCGTCA CGCCGGCCAT CGCCAATTTC GGATGGCGAG CCACCTACCT GGGCCTTGCG
GCGGTCGTCC TTGCACTTTT GCCATTGATT GCCTACTTCC TGCGGGGCGC GGATGCGGCC
CCTGCAGAGA AGGGCCGCCG TGCCCCAGCT GGAAGTAACC TGAAGGCGCT GGCCGATCCG
CGCTTCTTCC GCATTGCCGC TGTCTTCCTG CTGTGCTCGG TCGGCATCTT CGGCACGATC
GTGCACGTCG TTCCAATGCT CACCGACCTC GGGCTTTCCC CGAACCGCGC CGCCGGTCTC
GCCAGCATCC TTGGCGTGGC GGTCATCGTC GGACGAATCG TCACGGGCTT TCTGCTGGAC
ATGTTCGATG CCGCGCGCTT GTCGGCGACG CTCTTCATGC TGTCTGCCAC CGGCATGCTG
CTGCTGGCAA CGGGCCAACC GGCGCTGGTG CTTCCCGGGT TGCTCATGAC TGGCTTCGCG
GTCGGCGCGG AGTTCGACCT CGCAGCCTAT CTGGTGAGCC GGAAATTCCC GCTGAACCTC
TACAGCACCC TCTTCGGGGG TGTCTATGCC ACGGTGGCCA TTGGCGCCGG CATCGGGCCA
TTCCTCGCGG GACGGATCTT CGACATTTCC GGCAGCTATG TCTCGTGGCT CTGTCTGGCA
GCGGGATTGC TGCTTGCGGC CGCAATGCTC TGCCTCATGG AACGTCCGGC CGCCAAGCAC
GCGAGCGGCA CGGTCGCAGC GGCGGGTTCG AGCGAGCGCT GA
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| Protein sequence | MTPSPHSPSE LRQHWRYVLG CFLGLASGVS SLYFYSSGLF LKPLAAEFGW TRGTASLGSL
ISSVLLGCAA PFIGQVIDRY GARRVTLLSL VGLSTSFLLL GVWTQGLASF LALVTVLTLL
GGATSPLSFT KILVGRFSRQ RGLALGIAIT GTGVGAILIP LIVTPAIANF GWRATYLGLA
AVVLALLPLI AYFLRGADAA PAEKGRRAPA GSNLKALADP RFFRIAAVFL LCSVGIFGTI
VHVVPMLTDL GLSPNRAAGL ASILGVAVIV GRIVTGFLLD MFDAARLSAT LFMLSATGML
LLATGQPALV LPGLLMTGFA VGAEFDLAAY LVSRKFPLNL YSTLFGGVYA TVAIGAGIGP
FLAGRIFDIS GSYVSWLCLA AGLLLAAAML CLMERPAAKH ASGTVAAAGS SER
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