| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4292 |
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| Symbol | |
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| ID | 7970479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4535961 |
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| End bp | 4536956 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644794878 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002946170 |
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| Protein GI | 239817260 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA CCCCAAAGAT CGCGTTGGAG GAGCACTTCT CCGCGCCCGG CTTCGACGCG
TACTCGGCCC CATACACCCG AGCGCTGCCC GCCGAATTCG TCGCCAAGCT CGACGCCAGG
CTGACCGACT TCGACGATCA GCGCCTTGCA GAGATGGACG CAGGGAACAT CGAGTACGTC
GTGCTGTCGC AAACGATGCC TGGTGTACAG GCTGAGGCGG ATCGCGACAC CGCCGTGCGC
CGAGCACGCG AGAACAACGA ATTCCTTGCC GAGCGCGTGT CGCGCCATCC GCAGCGCTTC
GGCGCCTTTG CGCACGTGGC CATGCAGGAT CCGAGCGCCG CAGCAAAGGA ACTGGAGCGC
ACCGTCGTCG AACACGGCTT CAAAGGCGCG ATGATCAACG GCCATACCCT GGGTCGCTAC
TACGAAGGTG GCGCGTTCGA TGTGTTCTGG GAGCGCGCAC AGGCGCTTGG CGTGCCCATC
TATCTGCATC CCAACGCGTT CAGCCAGGCA CCGGCTTTAC TCGAAGGCAT GCCGGTGCTC
CAGGGCGCTG CATGGGGATG GGGCGTCGAA ACGGCGGGCC ATGCGTTGCG CCTGCTGTTC
GGCGGGGTGT TCGACAGATT CCCGCGCCTG ACCCTGGTGT TGGGCCACAT GGGGGAGGCC
CTTCCGTACC AGCGCTGGCG CATGGACAGC CGCTTCGCCG CGTATCCATC CGGCATCAAG
CTGGCGCGCA AACCCAGCGA GTACATCGGC AGCAACATCG TGATCACCAC GTCCGGCGTG
TGCTCTGCAC CGGCCCTGCT GGGCGCCATT GGCGAGCTCG GGGCACAGGC CGTGCTCTTT
TCGGTGGACT ACCCCTACGA GTCCACCGCC GAGGCCTGCA CCTTCATCGA AGACGCCCCC
CTGGACGACA AGACCCGGGC ACAGGTGTGC CATGGCAATG CGCGCCGGCT CTTCAAGCTA
GGCAGCCCAG AAGACCTGGC GCTGCTGCAG TTCTGA
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| Protein sequence | MNQTPKIALE EHFSAPGFDA YSAPYTRALP AEFVAKLDAR LTDFDDQRLA EMDAGNIEYV
VLSQTMPGVQ AEADRDTAVR RARENNEFLA ERVSRHPQRF GAFAHVAMQD PSAAAKELER
TVVEHGFKGA MINGHTLGRY YEGGAFDVFW ERAQALGVPI YLHPNAFSQA PALLEGMPVL
QGAAWGWGVE TAGHALRLLF GGVFDRFPRL TLVLGHMGEA LPYQRWRMDS RFAAYPSGIK
LARKPSEYIG SNIVITTSGV CSAPALLGAI GELGAQAVLF SVDYPYESTA EACTFIEDAP
LDDKTRAQVC HGNARRLFKL GSPEDLALLQ F
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