| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4289 |
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| Symbol | |
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| ID | 7970476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4532841 |
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| End bp | 4534094 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794875 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002946167 |
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| Protein GI | 239817257 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.89737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAT GCGGCATCGT CATCGTCGGT GCGGGCCAGT CGGCGGCTGT CGCGGCACAC
GCCCTGCGCG AGCATGGCTA CAGCGGGCGC ATCACGATGC TGGGGCGCGA GCGCCACAGA
CCGTACGAGC GCCCGCCTTT GTCCAAGGCC GTCCTGGTCG CTGCCGACGC CCCCCGGCTC
GACGTCCTCA CGGACGAATC CTGGGCGCGC AGCAAGATTG ACCTGCTCAG CGGCAGCGAT
GCGGTTGCAC TGGATCTTGC GCAGCAGCAC GTCCGCCTGG CGGACGGGCA GGTGCTCGGG
TACGAGATCT GCCTGCTCGC CACCGGCGGC GAGGCCGTCA CGCTCGCATC CGTCCCCGCC
GGTCGGCCGG GTGTGCACTA CATCCGGACT CTGGATGACG CGCGCAGGCT ACGCGCAGCC
CTTCAAGGAA CGCCGCAAGT CGCAATTCTC GGCGGGGGTT TCCTCGGCCT CGAAATCGCC
CACTCGGCAC TGTCCGCAGG CGCTTCGGTG ACAGTGCTCG AACGCGCCAC AGCCCTGCTC
GATCGCTTTG TGCCGCCGCA GGCGTCGGCA TGGCTGGAAT CGCGAACGCG TGCAGCGGGC
GCAACGCTCC TGCTCGGTGC TTCCTGCAGC GGCGTCCATT CACTGCCGGC CGGTCGGTCG
CGCCTGAGCA CCAGCACCGG CGATCTGGAA GTGGATGAGG TGGTCGTCGC CATCGGCCTG
TTGCCCAACG ACGCGCTGGC GCGCGATGCG GGGCTGCAGA TCGCGGCAGG CGGCGGCATT
CTGGTCGACA CGTCCTGCCG CACCAGCGAC GCACACGTGT TTGCATGTGG CGACTGCACC
AGCCAGCGCC GCCCCGGCCA GGCGGCACCA ACGCGCCTCG AATCCTGGCA GAACGCGAAC
GAGCAGGGGC GCACTGCCGC TGCCGCCATG CTGGGCCTGC CTCTTCCTGC ACCCGCGGTG
CCGTGGTTCT GGACCGACCA GGGGAAACAC AACATCCAGA TGCTGGGCCT GCCGGCCAAC
GATCTCGAAT ATGTGCGCCG CGGCGACCCG GCCGACGACA AGGTGCTGTG GATCGGCCAT
CGGGGTTCTG TCCCCTTGCA CGGCGTCGCC ATCAATGCGG GCGCCGACCT GCGAGCCGTT
CGCCCTCTCT TCGAACGTGG GCGGCCCGTG CAGCTGGAGG ACTTTCAACT GGACGCCACC
AATCTGCGCA CATGGGCCAA GCAGATGCAG GCCGACGTCG CGACCACCGC TTAA
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| Protein sequence | MTSCGIVIVG AGQSAAVAAH ALREHGYSGR ITMLGRERHR PYERPPLSKA VLVAADAPRL
DVLTDESWAR SKIDLLSGSD AVALDLAQQH VRLADGQVLG YEICLLATGG EAVTLASVPA
GRPGVHYIRT LDDARRLRAA LQGTPQVAIL GGGFLGLEIA HSALSAGASV TVLERATALL
DRFVPPQASA WLESRTRAAG ATLLLGASCS GVHSLPAGRS RLSTSTGDLE VDEVVVAIGL
LPNDALARDA GLQIAAGGGI LVDTSCRTSD AHVFACGDCT SQRRPGQAAP TRLESWQNAN
EQGRTAAAAM LGLPLPAPAV PWFWTDQGKH NIQMLGLPAN DLEYVRRGDP ADDKVLWIGH
RGSVPLHGVA INAGADLRAV RPLFERGRPV QLEDFQLDAT NLRTWAKQMQ ADVATTA
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