| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4287 |
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| Symbol | |
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| ID | 7971371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4529678 |
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| End bp | 4532059 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794873 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002946165 |
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| Protein GI | 239817255 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.539264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG CAGACATTCC GGCGAGAGTG CTCAAGCGCG AGGGCATCGG TGCCCGGGTG
CCTCGCAAGG AGGATGCGCG CCACATGGTG GGCAAAGGCA ACTTCGTGGG CGACTTCGTG
CTGCCGGGTC TGCAGGAGGT CGCGTTCCTG CGCAGCCCTC TGGCGCACGC CACCATCACG
GGTGTCGAGA TTCCGGAAGC GCTTGCGGGG AAGGTGTTCC TGCGCGAGAT GATGCTGGAT
GCAGCGGACA TCGGTTCCCC TTCTTCGCTA CCCACATACC AGTACTCGGC CTTGCCGCCG
TTGGCTTCGG GCAAGGTCCG GCACGTGGGA GAGGCGGTCG CCATGGCTGT TGCGCCAACG
CGTGCAGTGG CGGAAGACCT GCTCGAGGAG GTGCAGGTCT CCTATGACGA GCTGCCCGTC
TACCACGGCG CCGAGTCTTC TCTTGCGGCG ACGGGAGACT TCCTTCATCC TGGGTGGAAA
GACAATGTCT TTCTCACGCT GCGGGCCAAT CGCGACTTCG ATGAACTTGC CGCGAAGGCG
GAAGTGAAGG TCAGCCGCAC CGTCGAGCTG TCGCGTCAGT GCATCGTGCC GCTGGAGGGC
AAGTCGGTGC TGGCCTACTG GGACTTCCAG GCCGATCAAC TCGTGGTCGT CAGTGCGACA
CAGGTCCCGC ACCTGCTGCG CGTCGGTATC GCCCAGCACC TCTCGATGAA CGAGGAGGCG
GTACGCGTGG TGTCTCCCGA CGTGGGAGGC GCCTTTGGCT ACAAGGGGCA GCTGTACCCC
GAAGATCTGT GCATTGCCTG GCTGGCCAAA ACATACCGAA CCCCATTCCG CTATCTGGAG
GATCGGCGCG AACATCTGAT CGTCGGCGCC AACACGCGGC AGCATCATTA CCAGCTCACT
GCCTACGCGG ACCGCACGGG AAAGCTTCTC GCTTTGGACG CCGTCATCAC CATCGACGGC
GGCGCCTATT CCTACTATCC CTTCTTCGTC GGTCTGGAGC CTGGGCAGGC GATCGGCAAC
CTGCCGGGCC CCTATACCTT CCGTGGCTAT CGCTGCGAGA CCCTGTGTGT CGCGACCAAC
AAGCCGGGCT TCATGGCTTA CCGCGGCGTG GCGCGCACCG GCGTGTGTTT CGCGATCGAA
CTCCTCATGG ACGCCGTGGC GCGTGAAGTG GGCCGAGAAC CATGGGAGGT TCGCATGGAC
AACCTCGTCC CGGCCGCCGC CATGCCTTAT GTCAACGTAG CCAACAAGCA CTTCGACAGC
GGCGACTTTC CCGCGAGCCT GCGTCGCGCC GTGGAGATGA TCGGACTCGC TACAGTCCGT
GAGCGACAAG CCCGGGGAGA GCCGGACGGA CGTCGGATCG GGTTCGGGAC GGCAACCTAC
ACGGAGCAGT CTGCCCACGG CACGACCGTT TTCGCCAACT GGGGGTTGCC GGTGGTGCCT
GGCTTCGATC AGGCGGTCGT CAGGATGACC GCAGATGGCG GGCTGGAAGT GCGCGTCGGC
GTGCACTCGC ATGGCCAGGG CATGGAGACC AGCTTCGCGC AGATCGCGAA TGACGTACTT
GGCATTCCTG TTGCCCGGAT CCGGGTGGTG CATGGCGACA CCGCGCTCAC GCCCTTCTCC
TCGGGGACCT ACGCCTCTCG GGCCACCGTC ATGTCAGGAG GCGCCATCTC GACGGCGTGC
AAGGAACTGT TGCCTCGCAT CCAGTCGATC GCCGGCTATC TCATGGGCGT GGATCCGCAG
ACCGTCGCGC TGGTCGAGGG GTTTGCGGTC GCCGGGGAAA AGTCGATTCC GCTGTCCCAA
GTGGGCGGCG CGTGGTACCT CACGCCACAG GACCTGCCTG AGAACGTTCA TCTCGGTGGA
CTGGAGGTTT CGCGTGCATA CAAGCCCAGG GTCGACACGG GTACCTTTAC CTATGCCACC
CATGCCGTGG TGGTCGCCGT CGACACGCAG ACAGGCGAGG TCGAGATCCT CGACTACGTC
GTTGTCGAGG ATTGCGGCAC CATGGTCAAT CCGATGATCG TGGAGGGGCA GACCATCGGG
GGCATCGCGC AGGGCATCGG CACCGCGATG TATGAAGAAA GCCCATACGA CGACCAAGGC
CAGCCCCTGG CTTCCACACT GGCCGACTAC ATCTTGCCTG GCGCCACGGA AGTGCCGCGC
ATCCGTATCG AGCACTTCGA GACACCTTCG CCTCACACCG AATTCGGCGC CAAGGGCGTG
GGGGAGGGAG GCGCGATCGC GCCGCCGGCG GTGATCTTCA ATGCTGTGAA CGACGCGTTG
CGAGGCACGG GTGCTGCGGA GGTGCTGATG ACGCCCCTGA CGCCGCGTCG CTTGCTCAAG
GCCCTCGAAA GCGCGAAGCC GGAACAGGGG CTCGTCAAAT GA
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| Protein sequence | MNQADIPARV LKREGIGARV PRKEDARHMV GKGNFVGDFV LPGLQEVAFL RSPLAHATIT
GVEIPEALAG KVFLREMMLD AADIGSPSSL PTYQYSALPP LASGKVRHVG EAVAMAVAPT
RAVAEDLLEE VQVSYDELPV YHGAESSLAA TGDFLHPGWK DNVFLTLRAN RDFDELAAKA
EVKVSRTVEL SRQCIVPLEG KSVLAYWDFQ ADQLVVVSAT QVPHLLRVGI AQHLSMNEEA
VRVVSPDVGG AFGYKGQLYP EDLCIAWLAK TYRTPFRYLE DRREHLIVGA NTRQHHYQLT
AYADRTGKLL ALDAVITIDG GAYSYYPFFV GLEPGQAIGN LPGPYTFRGY RCETLCVATN
KPGFMAYRGV ARTGVCFAIE LLMDAVAREV GREPWEVRMD NLVPAAAMPY VNVANKHFDS
GDFPASLRRA VEMIGLATVR ERQARGEPDG RRIGFGTATY TEQSAHGTTV FANWGLPVVP
GFDQAVVRMT ADGGLEVRVG VHSHGQGMET SFAQIANDVL GIPVARIRVV HGDTALTPFS
SGTYASRATV MSGGAISTAC KELLPRIQSI AGYLMGVDPQ TVALVEGFAV AGEKSIPLSQ
VGGAWYLTPQ DLPENVHLGG LEVSRAYKPR VDTGTFTYAT HAVVVAVDTQ TGEVEILDYV
VVEDCGTMVN PMIVEGQTIG GIAQGIGTAM YEESPYDDQG QPLASTLADY ILPGATEVPR
IRIEHFETPS PHTEFGAKGV GEGGAIAPPA VIFNAVNDAL RGTGAAEVLM TPLTPRRLLK
ALESAKPEQG LVK
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