Gene Vapar_4277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4277 
Symbol 
ID7971361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4518457 
End bp4519884 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content70% 
IMG OID644794864 
Productphenylhydantoinase 
Protein accessionYP_002946156 
Protein GI239817246 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR02033] D-hydantoinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTCC GCGACCTCGA CCTCGTGGTG CGCAACGCCC GCGTTGCCAC CGCCAGCGAC 
ACCTTCGACT CGGACATCGG CATCCGCGAC GGCCGCATCG TGCAGCTGGG CCTCGCGCTG
CCCCCCGGGC GGCGCGAGAT CGATGCCGCC GGCGGCTACG TGACGCCGGG CGGCGTCGAT
GCCCACTGCC ACCTCGACCA GCCGATGGAG CCGCCGGTGC GCATGGCCGA CGACTTCGAC
ACCGGCACCC GCGCCGCGGC CTGCGGCGGC ACCACCACGG TGATCCCGTT CGCGGCGCAG
CACAAGGGCC AGTCGCTGCG CGCCGCCGTG CAGGACTACC ACCAGCGCGC CGAAGGCCGT
GCCCACGTCG ACCATGCCTT CCACCTGATC GTGAGCGACC CGACCGAGGA GGTGCTCAAG
CACGAGCTGC CGCAGCTGAT CGCCGAGGGC TACACCTCGT TCAAGATCTA CATGACCTAC
GACGACCTGA AGCTGGACGA CGGCCAGATC CTCGACGTGC TGGCGGTGGC CAGGGAGCAC
GGCGCGATGG CCATGATCCA TGCCGAGAAC GCCGACTGCA TCGAGTGGCT GACCAAGCGG
CTCGAAGCCA GCGGCCGCAC CGCGCCGCGC TTCCATGCGC ATGCGCGGCC GATGCTGGTG
GAGCGCGAGG CGACCCACCG CGCGATCGCG CTGTCGGAAC TGGTCGACGT GCCGATCATG
ATCGTGCACG TGTCGGGCCG CGAAGCCGTC GAGCAGATCC GCTGGGCGCG CGCGCACGGC
CTGAGCGTGT TTGCCGAGAC CTGCCCGCAG TACCTGTTCC TGACGGCCGA GGACCTGGGC
ATCGACGACA GCTACCAGGG TGCACGCTGC GTCTGCAGCC CGCCGCCGCG CAACCGCGAG
AACCAGCAGG TGATCTGGAA CGGCCTCGCC GACGGGCTGT TCACCATCTT CTCGTCGGAC
CACGCGCCGT TTCGCTACGA CGCACCCGAG GGCAAGAAGC CCGGCGGCGA AGAGGTGGCC
TTCCGCCACA TTCCCAACGG CATCCCGGGC ATCGAGACGC GGCTGCCGCT CTTGTTCTCG
CACGGCGTGC TCGACGGGCG CATCACGATC AACCGCTTCG TCGAGCTCAC CTCCACCAAT
CCCGCCAAGG CCTACGGCCT GCATCCGCGC AAGGGCACGA TCGCCGTCGG CGCCGACGCC
GACCTCGTGG TCTGGGGCAG CACGCCGCGC GCCATCCGCA ACGCTGACCT GCATCATGCG
GTCGACTACA CGCCCTACGA AGGCATCGAC GTCAAGGCAT GGCCCGCGCT GACTTTGGCG
CGCGGCGAAG TCGTGTGGGA CGGCGAGCGC TTCCATCCGC GCGCCGGGCG CGGCGAATTC
CTGCGGCGGG CCGGGCCCAC CTTGCTGCCC ACCCGTCGAC CCGCCTAA
 
Protein sequence
MTFRDLDLVV RNARVATASD TFDSDIGIRD GRIVQLGLAL PPGRREIDAA GGYVTPGGVD 
AHCHLDQPME PPVRMADDFD TGTRAAACGG TTTVIPFAAQ HKGQSLRAAV QDYHQRAEGR
AHVDHAFHLI VSDPTEEVLK HELPQLIAEG YTSFKIYMTY DDLKLDDGQI LDVLAVAREH
GAMAMIHAEN ADCIEWLTKR LEASGRTAPR FHAHARPMLV EREATHRAIA LSELVDVPIM
IVHVSGREAV EQIRWARAHG LSVFAETCPQ YLFLTAEDLG IDDSYQGARC VCSPPPRNRE
NQQVIWNGLA DGLFTIFSSD HAPFRYDAPE GKKPGGEEVA FRHIPNGIPG IETRLPLLFS
HGVLDGRITI NRFVELTSTN PAKAYGLHPR KGTIAVGADA DLVVWGSTPR AIRNADLHHA
VDYTPYEGID VKAWPALTLA RGEVVWDGER FHPRAGRGEF LRRAGPTLLP TRRPA