| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4272 |
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| Symbol | |
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| ID | 7971356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4513701 |
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| End bp | 4514882 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794859 |
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| Product | Formyl-CoA transferase |
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| Protein accession | YP_002946151 |
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| Protein GI | 239817241 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.329604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACG CGCGACAACT GCCGCTGCAG GGCATCCGGG TGCTGGACGT GAGCCAGGTC
ATGGCCGGGC CGTTCGCCTG CATGCTGCTG GCCGACCTGG GCGCCGACGT GATCAAGGTC
GAGCCGCCGG GCGGCGACCA GACCCGCGGC GCCATGGGCT TCAAGATGAA GGGGCCGGAC
AGCATGGGCT TCCTGAACAT GAACCGCAAC AAGCGCTCGC TGACGCTGGA CCTCAAGAAC
GAGGAGGACC GCGCGTCCTT CTACAAGCTG GCCCGGACCG CCGATGTGAT CGTCGAGAAC
TACCGTCCCG GCGCGGTGCA GCGCCTGGGC ATCGACTACG AGTCGATCAA AAAGATCCAC
CCGAAGATCG TGTACGTCAG CATCTCCGGC TTCGGCCAGA GCGGCCCCTG GGCCGAGCGG
CCGGGCTTCG ACCTGATGGC GCAGGCCATG TCCGGCGTGA TGAGCGTGAC CGGCTATGCC
GGCGAGAAGC CGGTCAAGGC CGGCGTGCCG GTGGCCGACA TCGGCTGCGC GCTGTTTGCC
ACCTATGCGC TGCTCGCGGC CTACATCGGC GCGCAGAAGT CGGGCGTGGG CCAGCACATC
GACGCCTCGC TGTTCGACGC GGCCATGGCC TTCTCGGTCT GGGACATGTC CGCGTACTGG
GGCACGGGCG TGCCGCCGGC GCCGCTGGGC ACCAGCAACA AGATGAGCGC GCCCTACCAG
GCGGTCAAGG CGCGCGACGG CTACTTCGTG ATGGGCGCGA CCAACCAGAA GCTCTGGACC
CGGCTGTGCG AGCTGCTGCG GCGGCCGGAC CTCGCCGCGC ACCCGGACTA CGCGAGCGTG
TCGCAGCGCC TGAAGCACCG CGAGGCGCTG ATCGAGGCGC TCGAACGGGA GTTCGGCCAG
CGCGACAGCG CCGACTGGAT CGACGCCATG CTGGCCGCCG GCATCCCGGC CGGTCCCATC
CTGTCGTATC CCGAGGCCTT CGAGGGCGAG CACGGCAGGC ACCGCCGCAT GTGCATGGAG
ATCGACCATC CGATCGAGGG CAAGGTCAAG AACATCGGCT TTCCGGTCAA GCTGCTGGGT
ACGCCGCAGC AGGTGCGCCG GCATCCGCCG CTGCTGGGCG AGCACAACGA GGAAATCCTG
GCCGAGATCA ATGTGCCGGC GGGCGCGGCG GAGGCCTCAT GA
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| Protein sequence | MNHARQLPLQ GIRVLDVSQV MAGPFACMLL ADLGADVIKV EPPGGDQTRG AMGFKMKGPD
SMGFLNMNRN KRSLTLDLKN EEDRASFYKL ARTADVIVEN YRPGAVQRLG IDYESIKKIH
PKIVYVSISG FGQSGPWAER PGFDLMAQAM SGVMSVTGYA GEKPVKAGVP VADIGCALFA
TYALLAAYIG AQKSGVGQHI DASLFDAAMA FSVWDMSAYW GTGVPPAPLG TSNKMSAPYQ
AVKARDGYFV MGATNQKLWT RLCELLRRPD LAAHPDYASV SQRLKHREAL IEALEREFGQ
RDSADWIDAM LAAGIPAGPI LSYPEAFEGE HGRHRRMCME IDHPIEGKVK NIGFPVKLLG
TPQQVRRHPP LLGEHNEEIL AEINVPAGAA EAS
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