| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4260 |
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| Symbol | |
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| ID | 7971344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4500873 |
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| End bp | 4501319 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644794847 |
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| Product | UspA domain protein |
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| Protein accession | YP_002946139 |
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| Protein GI | 239817229 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.290835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAAGC GCATCCTCGT CCCCACCGAT GGCTCTTCGC TCTCCGAGCA GGCGGTTGCC
ACTGCCATCG ACCTGGCGCT GCTGGCGGGT GCCGAACTGG TGAGCGTCAC TGTCGCGCAC
ATCCAGCCTT ATGGCTATTT CGAAGGCTCG ATGGTGCTGA ACCAGCGCGA GATCGAAGCC
TCGCAAGAGC AGGTGGAGCA GTCCGCGCAG CGCCTGGTCG ATGCGGTCAG GAGCGCCGCC
ATCGCCCGGG GCGTGCGCAG CGCGCAGGCC ATCGTCATGA AGTCGAACCA GGTGGCCGAA
GCCATCATCG CCACGGCCAA GAACCAGCAG TGCGACCTGA TCGTGATGGC CTCGCACGGC
CGGCGCAGCC TGGCGCGGCT GCTGATGGGC AGCGAGACGC TGCATGTGCT GACCCACTCG
CACATTCCGG TGCTGGTGCT GCGATAG
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| Protein sequence | MYKRILVPTD GSSLSEQAVA TAIDLALLAG AELVSVTVAH IQPYGYFEGS MVLNQREIEA
SQEQVEQSAQ RLVDAVRSAA IARGVRSAQA IVMKSNQVAE AIIATAKNQQ CDLIVMASHG
RRSLARLLMG SETLHVLTHS HIPVLVLR
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