| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4258 |
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| Symbol | |
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| ID | 7971342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4498463 |
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| End bp | 4500052 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794845 |
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| Product | histidine kinase |
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| Protein accession | YP_002946137 |
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| Protein GI | 239817227 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.432696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCC TGACACTTTC CAGGAAGATC TTCCTGGCGC TGGCCGCCTT GCTGATCGTG
CTGCTGCTCA GCTTCGCGGG GCTTTCCATC GTGGCGCTGC AGCGCGGCCT CGGCTCCTAC
GTGGCCGAGA TCGAGATCCG GCGCATGGAC TGGCTCTCGC AGCTGCTGCT CAAGCACTAT
GCGGCCAACG GCGACTGGAA GAAGCTGCAG GGCAACGACG ATGCCTGGCA GCGCCTGCAG
ATGGGCCGGC TCGCCGCGGT GCTCGACGGC GCCAGCAATG CCGACGAAAG AAAGCTCCCG
CCCTGGTACG AGAACCGCGG GCCGGGCGCA AACGGCAACG GCCCCGAAGG CAACCCCGAG
AACGGATCGC GCCCGCCGCC TCCTGCGCCC TCGCCCCAGC TCGAGCTGCT GCCCCGGCGC
TTTCCGCCGC CACCGCCGCT GGGCTTCTTT CCCGATCCGC GCGAAGCCGC CGACTCGATC
TTCCAGCGCC TGGGCGTGGT CGACGCGCAC GGTGCGCACG TGGTCGGCGC CAAGGTCGAC
CCGGAGAATG CCGCGCGCCT GCCGATCCGC CACGGCCGCT CGGTCGTCGG CTACCTGGTG
CTTGCGCCGA TGCAGGGCCT GGAGAGCGAG GCCGACCGCG CCTTTCTCGC GCGCCAGTCC
GGCGTGATCG CCCTCACCGG CCTGTGCGGG CTGGCCTTTG CGCTGATGCT GTCGTGGCTG
CTCGCGCGGC GCTGGTTCCG GCCGATCGAC GAGCTCACGC AGGCCGCGCA GCACGTGGCG
CGCGGGCGGC TGTCCACGCG CGTGGCCGTG CATGGCTCGG ACGAGCTTGC GCTGCTCGGC
AAGACCTTCA ACGACATGGC GCAGCGCCTG GACACGGTGG AGGCCTCGCG CCGCGCCTGG
CTGGCCGATG CGGCCCACGA ACTGCGCACG CCGCTGGCCG CCATGCGCGC AGAAATAGAG
GCGCTGCAGG ACGGCGTGCG CAGCTTCGAC GAGCGCACCG CGCTGCGGCT GCATCGGCAG
GTGATCCGCC TCGGCCAACT GGTGGACGAC CTGCGCAGCA GCATGCGCGA GCCGCAGAAC
GACCTGCTCG CGACCACCGT GTTCCCGCTC TCGCTGCTGA AGGAAGCGCT CGACCACACG
CGCGACCGGT TCGCTGCGCG CGGCATCGCG GTGGACCGCA GCGCCATCGA CCGTGTCTCG
GCGCGCGCCC AGCCGATGAT CGACGGCGAC GCGCACCGGC TGCACCAGGT CTTCATGAAC
CTGCTGGAGA ACACGCTCGC CTACACCGAC GCCGGCGGCC GGCTGCGCAT CGGCGCCACG
GTCGACGGGG CGTGGACGGG CAACAGCCTG ACCCTGCAAT TCGACGACAG CGCGCCGGGC
GTTGCCGAAG CGGAATTGCC GCGCCTGTTC GACCGGCTGT TCCGCGGCGA GTCGTCGCGC
AGCCGCGAGC TCGGCGGCTC CGGGCTCGGC CTGTCGATCT GCCGCGCGGC CATCGAGGCC
CATGGCGGCA CCATCGATGC CCAGGCTTCG GAGCTCGGCG GACTGCGCGT GACCATCACC
CTTCCGCTGT CGAGGAGCGC ATCGCCATGA
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| Protein sequence | MPRLTLSRKI FLALAALLIV LLLSFAGLSI VALQRGLGSY VAEIEIRRMD WLSQLLLKHY
AANGDWKKLQ GNDDAWQRLQ MGRLAAVLDG ASNADERKLP PWYENRGPGA NGNGPEGNPE
NGSRPPPPAP SPQLELLPRR FPPPPPLGFF PDPREAADSI FQRLGVVDAH GAHVVGAKVD
PENAARLPIR HGRSVVGYLV LAPMQGLESE ADRAFLARQS GVIALTGLCG LAFALMLSWL
LARRWFRPID ELTQAAQHVA RGRLSTRVAV HGSDELALLG KTFNDMAQRL DTVEASRRAW
LADAAHELRT PLAAMRAEIE ALQDGVRSFD ERTALRLHRQ VIRLGQLVDD LRSSMREPQN
DLLATTVFPL SLLKEALDHT RDRFAARGIA VDRSAIDRVS ARAQPMIDGD AHRLHQVFMN
LLENTLAYTD AGGRLRIGAT VDGAWTGNSL TLQFDDSAPG VAEAELPRLF DRLFRGESSR
SRELGGSGLG LSICRAAIEA HGGTIDAQAS ELGGLRVTIT LPLSRSASP
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