Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4247 |
Symbol | |
ID | 7971331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4489621 |
End bp | 4490292 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644794834 |
Product | Urease accessory protein UreF |
Protein accession | YP_002946126 |
Protein GI | 239817216 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0830] Urease accessory protein UreF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGATC CCCACAGCCT CCTGCAGCTC ATCTGGCTCG CCTCCCCCGC CCTGCCCGTC GGCGGTTTTT CCTATTCGGA AGGCGTCGAG GCGGCCGTCG AATGGGCCGG CATCGATTCG GAAGCCAAGG CCATCGAGTG GCTCTCCGAC CAGTTGCACC TGAGCTTCGC GCGCGGCGAC CTCGCGCTCG TGGCGCAGGC CATCCCGGCC TGGCGCGCCG GCGACGCGGC GCGCATCCGC GAACTCAACA CATGGGTGAT GACCACCCGC GAATCGGCCG AATTCTTCCT GCAGACAGAA CAGATGGGCC GCTCCTTCGT CGAATGGCTC AAGCTGCACC ACGACGACAC GGCCGCGGTC TTTGCCGGCC TGCCCGCGAG CTATCCCGTC GCCTTTGCCT TTGCCGCGAG CCGCACCGGC GCCTCCGTGC ACGACGGCTG CCTGGCCTTC GCCTTCGGCT GGGCCGAGAA CATGGTGGCC GCGGCGGTCA AGGCCGTGCC GCTCGGCCAG AGCGCGGGCC AGCGCATCCT GGCGCGGCTC GCCAGCGAAA TTCCCGCCGC CGTCGAGCGT GCGATGCACC TCTGCGACGA CGAACGCCAG GCCTTTGCGC CCCTGCTGGC CGTGTTGTCG GCACGCCATG AAACACAATA CTCGCGCCTC TTTCGAAGCT GA
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Protein sequence | MPDPHSLLQL IWLASPALPV GGFSYSEGVE AAVEWAGIDS EAKAIEWLSD QLHLSFARGD LALVAQAIPA WRAGDAARIR ELNTWVMTTR ESAEFFLQTE QMGRSFVEWL KLHHDDTAAV FAGLPASYPV AFAFAASRTG ASVHDGCLAF AFGWAENMVA AAVKAVPLGQ SAGQRILARL ASEIPAAVER AMHLCDDERQ AFAPLLAVLS ARHETQYSRL FRS
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