| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4242 |
|---|
| Symbol | |
|---|
| ID | 7971326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 4485978 |
|---|
| End bp | 4486283 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644794829 |
|---|
| Product | urease, beta subunit |
|---|
| Protein accession | YP_002946121 |
|---|
| Protein GI | 239817211 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0832] Urea amidohydrolase (urease) beta subunit |
|---|
| TIGRFAM ID | [TIGR00192] urease, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCTG GCGAACTCCT CACCGACGAC GGCGAGCACA CGCTCAACCC GGGCCGCCGC
ACGCTCACGC TGGTGGTGCA GAACACCGCC GACCGGCCGA TCCAGGTCGG CTCGCACTAT
CACTTTGCCG AGACGAATGG CGCGCTCGGC TTCGACCGCG CGGCTGCGCG CGGCATGCGG
CTGAACATCG CCTCGGGCGC CGCGGTGCGC TTCGAGCCGG GCCAGCAGCG CACGGTCGAG
CTCGTCGACT TTTCGGGCGA TCGCATCGTC TACGGCTTTC GCGGCCTCAT CCAAGGAAAG
CTCTAA
|
|---|
| Protein sequence | MIPGELLTDD GEHTLNPGRR TLTLVVQNTA DRPIQVGSHY HFAETNGALG FDRAAARGMR
LNIASGAAVR FEPGQQRTVE LVDFSGDRIV YGFRGLIQGK L
|
|---|
| |