Gene Vapar_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4241 
Symbol 
ID7971325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp4485370 
End bp4485969 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content74% 
IMG OID644794828 
ProductHupE/UreJ protein 
Protein accessionYP_002946120 
Protein GI239817210 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCACA ACGCTTCCAA GACGCTTGCC CTCATTGCCA TGCTGCTGCC GCTCGCGGCC 
AGCGCCCACA CCGGTGCCGA TGGCGGCGTG CACCACGGCT TTGCCACCGG CTTTTTGCAC 
CCGCTGACCG GCGCCGACCA TCTGGCGGCG ATGGTCGCGG TCGGCCTCTG GAGCGCGCTG 
GCCGCCCGCC GCGCCTGGCC CGATCTGCTG TGGGCGCCGC TGGCCTTCGC GGGCATGCTG 
CTCGTGGGCG CGCTGATGGG CCTGGCGGGC GTGCAGCTGC CGGCAGTCGA GCCGATGATC 
GCGGCTTCGC TGCTGGTGCT GGGCCTGCTG GTCGCCACGC GCATCCATCT GCCGGCCGCA 
GCGGCCGCGG CGCTGGTGGG CGTGTTCGCC GTCTTCCACG GCGTGGCGCA TGGCCACGAA 
CTCGCGGGCG AACAAGGCGC CGCATTGACG CTGGCCGGCA TGGTCGGCGC CACCGTGCTG 
CTGCACGCCG CTGGCATCGC GATGGGCTGG GCGCTGCGGC GCGCCAACGC CTGGCTGCCA 
CGCCTGGCCG GCGCCGCTGT GCTCGGCCTG GGCGCAACGC TGCTGGCCCA GGCCATCTGA
 
Protein sequence
MRHNASKTLA LIAMLLPLAA SAHTGADGGV HHGFATGFLH PLTGADHLAA MVAVGLWSAL 
AARRAWPDLL WAPLAFAGML LVGALMGLAG VQLPAVEPMI AASLLVLGLL VATRIHLPAA 
AAAALVGVFA VFHGVAHGHE LAGEQGAALT LAGMVGATVL LHAAGIAMGW ALRRANAWLP 
RLAGAAVLGL GATLLAQAI