| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4236 |
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| Symbol | |
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| ID | 7971320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4478469 |
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| End bp | 4479389 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644794823 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946115 |
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| Protein GI | 239817205 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTCG CCGAAATAGA GACGTTCCGG GCCCTGATGC GCGCCGGCTC CACCCGCAAG
GCCGCGGCGC TGCTGCATGT GACGCAGCCC GCCATCAGCC AGTCGCTCAA GCGGCTCGAA
GCGCAGGCCG GCATGCTGCT GTTCCAGCGC ACCGGCGGGC GGCTGGTGCC CACGCCCGAG
GCGCAGGCGC TGTGGAGCGA GGTGGAACGC GTCTTCATCG GCATGGAGGC GATCGAGCAC
CGCATGCGCA GCCTGCGCGA CTTCGGCACC AACCAGCTCG AGCTCAGCTG CTATCCGGCC
TTCGGCCTGG GCTTCATGCC GCGCGCACTG GAACGCCTGA AGGCGCAGCG CGGCGACAAC
CCCTGGCCGC AGGTGTCGCT GCAGGTGCTC AGCTCCAAGG ACGTGCGCGA CCGCGTGGCC
AAGGGCGTCT CCGACTTCGG CCTGATGGCC GACGAACTTC CGCTCGAAGG CATCGATCAC
TCGACCTTCG CGCGTTTTCC CGGCGTGGTC GTGATGCCGC AAGGCCATGC GCTGGCGCGC
TTCAAGCGCG TCGAGCCCGA ACAGCTCGCG CAGGTGCCCT TCCTGGCACT GAACCCCGAG
GACCCTTCGC ACCGCGGGCT CGAAACCGCA CTGGCCGAGC GCGGCGCGTC GCTCCGGGTG
ATGGTGCAGA CGCCCTACGC GGCCAGCGTG TGCGAGATGG CCGTGCGCGG CCTGGGCGTG
GGGCTGGTCA ACCCGGTCAC CGCGCTCGAC TACGCGGAGC GCGGCCTCGT GGTGCGCCGC
CTCTCGGTCG ACGTGTTCTT TTCGTGCGTG CTGGCGCTGC CCGCGGGCAA GGTGCTGTCC
ACCACCGCGC GCGACTTTCT TTCGCTCATG CGCCGGCAGC TGGCGGAGGA CGAGAAGCGC
ATCCAGCGCT ACCTGCGCTG A
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| Protein sequence | MRFAEIETFR ALMRAGSTRK AAALLHVTQP AISQSLKRLE AQAGMLLFQR TGGRLVPTPE
AQALWSEVER VFIGMEAIEH RMRSLRDFGT NQLELSCYPA FGLGFMPRAL ERLKAQRGDN
PWPQVSLQVL SSKDVRDRVA KGVSDFGLMA DELPLEGIDH STFARFPGVV VMPQGHALAR
FKRVEPEQLA QVPFLALNPE DPSHRGLETA LAERGASLRV MVQTPYAASV CEMAVRGLGV
GLVNPVTALD YAERGLVVRR LSVDVFFSCV LALPAGKVLS TTARDFLSLM RRQLAEDEKR
IQRYLR
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