| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4235 |
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| Symbol | |
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| ID | 7971319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4477169 |
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| End bp | 4478368 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644794822 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_002946114 |
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| Protein GI | 239817204 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGCGC CCGTCATCCA CTTCAAGCTC GCCTCGGCTT CCGAGCCGTC CGGCACCGCG
CGACCCCGTC CGCCGCGCCC GCTGAAAAAC CCCCGCCTGC AGGGTTTTCG GTGCCTGCGC
TGCGATGCCC CCTATCCGCT GACGCTGGCG AACGACGGCT GCCCGGCCTG CCGCGGCATG
GGCGTCCATG TCGGGCTGCA CGCGAGCTAC CTGCCGGGCG GCGACAGCCC CGTGCCCATG
CCCTACGCGC CGGGCTTCAC GCTGGGCGAG GGCGGCACGC CGCTGCTCGA CATGCCGGAA
TTGGCGCACG AATTCGGCGT GGCGCGGCTC GCGCTCAAGG ACGAATCGTG CAACCCCACG
GGCTCCCACA AGGACCGCAT GACCGCGGTG GGCGTGGCCC AGGCGCTGGA CTTCGGCGCC
CACACGCTGG TGCTGGCCTC ATCGGGCAAT GCCGCGGTCT CGGCGGCGCA CTATGCATGG
GCTGCGGGGC TGGGCTGCGA AGTGGCCACT TACGAAGGCC TGCCCGCCGC CTACGCGCGG
CAGCTCGATG CGCTGGGCGC GCGGCGCCAC GCCTTTGCCG ACAACGCCGG CCGCTGGGCC
TTCGTGCGCG AGCGCTCGCA GCATCCGGGC TATTTCGCGC TGACCAATTA CCGCCTGCCC
GCCCTGGGCA GCGCGCCGCT CGCGATCGAG GGCTACAAGC CCATCGCCCT GGAGTGCCTG
GCCGAGGGCG GCCTGCCCGA CCACCTCGTG ATTCCCACGG CGCGCGGCGA CCTGGCCTGG
GGCATCTACG CGGGCTTTCG AGACCTGCTG GCCGCCGGGC GCATTTCGCG GCTGCCGCGG
CTCTGGCTGG TGGAGCCTTT TGCGCGCCTC TCGCGCGTGC TGGCCGGCGG GGCGCTCGAC
GGCGCATATC CCGGCCACAC CGCGCAGTTT TCCACCGCCG GCTCCACCGT GACCTTCCTG
CAGTGGCAGG CGGCCGTCGC CTCGGGCGGC GGCGCGGTGG TGGTGGGCGA CGAGCAGGCC
CGCGCGGCCC GGCAAAAGCT CACGGCGGCC GGCGTGAGCG CCGAACTGTG CGCGGCGGCC
GGGCTCGACG CGCTGCGCCA GCTGCGCGAG GGCAACGCGA TTGCCGCCGA CGCCCACGTG
GTGCTGATGC TCACCGCCAA CGCCTCGCGC GACCCGAGCT GGCCCGACCG GGCCGCCTGA
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| Protein sequence | MPAPVIHFKL ASASEPSGTA RPRPPRPLKN PRLQGFRCLR CDAPYPLTLA NDGCPACRGM
GVHVGLHASY LPGGDSPVPM PYAPGFTLGE GGTPLLDMPE LAHEFGVARL ALKDESCNPT
GSHKDRMTAV GVAQALDFGA HTLVLASSGN AAVSAAHYAW AAGLGCEVAT YEGLPAAYAR
QLDALGARRH AFADNAGRWA FVRERSQHPG YFALTNYRLP ALGSAPLAIE GYKPIALECL
AEGGLPDHLV IPTARGDLAW GIYAGFRDLL AAGRISRLPR LWLVEPFARL SRVLAGGALD
GAYPGHTAQF STAGSTVTFL QWQAAVASGG GAVVVGDEQA RAARQKLTAA GVSAELCAAA
GLDALRQLRE GNAIAADAHV VLMLTANASR DPSWPDRAA
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