| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4233 |
|---|
| Symbol | |
|---|
| ID | 7971317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 4475801 |
|---|
| End bp | 4476109 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644794820 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002946112 |
|---|
| Protein GI | 239817202 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGCC GCTCCGTCCC CCCCTTCACG CTGCAGCAGG CCGCCGAAGG TTCGCCCACC
CTGGCGAGCC TGATCGCCCG TGCGCGCGAC GCGAGCGAAC GGCTGCGGGC GGTCGAGGGG
CTGATTCCGC CGGCCATGCG CCCGGCCGTG CAGGCCGGCC CGGCCGAGGG CGACGTGTGG
TGCCTGCTGG TCAACGGCAG CGCGGCGGCC GCCAAGCTGC GCCAGCTGTC GCCGATGCTG
GTCACGCGGC TGCGCAGCAA GGGCTGGGAC GTGAACACGA TCCGGATCAA GGTGCAGTCC
GGACGCTGA
|
|---|
| Protein sequence | MNRRSVPPFT LQQAAEGSPT LASLIARARD ASERLRAVEG LIPPAMRPAV QAGPAEGDVW
CLLVNGSAAA AKLRQLSPML VTRLRSKGWD VNTIRIKVQS GR
|
|---|
| |