Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4230 |
Symbol | |
ID | 7971314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4470681 |
End bp | 4471556 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644794817 |
Product | protein of unknown function DUF815 |
Protein accession | YP_002946109 |
Protein GI | 239817199 |
COG category | [R] General function prediction only |
COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0216148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAGC AGTTCCAGAA GCTGATCGAG CGCGCCGAGC AGCTGATCGG CCGCATCGAG TCGATCCTGC CGCAGCCGCT CGCGGCCCCC GCCGACTGGA ACGCGTCGAT CGCCTGGCGC TACCGCCGCC GCAGCTCGGG CCATGGCGTG CTCGAGCCCG TCAGGCACGT GGCCGCCATG GCGCTCGACA GCCTGAAGGA AATCGACGTC CAGAAGGAAA AGATCGAGCG CAACACGCGC CAGTTCGTCG AGGGCAAGCC GGCCAACAAC GTGCTGCTGA CCGGCGCGCG CGGCACGGGC AAGTCGTCGC TGATCCGCGC CTGCCTGCAG GCCTATGCGC CGCAGGGGCT GCGCTTGATC GAGGTCGACA AGGCTGAACT CACCGACCTG CCCGACATCG TCGAGGTGGT GTCGCAGCGG CCCGAGAAAT TCATCGTGTT CAGCGACGAC CTGAGCTTCG ACGAGGGCGA GCCGGGCTAC AAGGCGCTCA AGTCCATTCT CGACGGCTCG ATCGCCGCGG CCACGCCCAA CGTGCTGATC TACGCGACCA GCAACCGGCG CCACCTGCTG CCCGAGTACA TGAAGGACAA CCTCAGCTAC ACCCACACCG AGGACGGCGA AGTCCATCCC GGCGAGGTGA TCGAGGAAAA GATCTCGCTG TCGGAGCGCT TTGGCCTGTG GGTCAGCTTC TATCCGTTCA GCCAGAACGA ATACCTGGCC ATCGTCGCGC AGTGGCTGTC GTCGTTCGGC GTCGACGCCG CCGCCATCGA GGCGGCGCGG CCCGAGGCGC TGGTCTGGGC GCTCGAGCGC GGATCGCGCA GCGGCCGCGT GGCCTACCAG TTCGCGCGTG ACTACGCCGG GCGGGCGACG GCATGA
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Protein sequence | MNEQFQKLIE RAEQLIGRIE SILPQPLAAP ADWNASIAWR YRRRSSGHGV LEPVRHVAAM ALDSLKEIDV QKEKIERNTR QFVEGKPANN VLLTGARGTG KSSLIRACLQ AYAPQGLRLI EVDKAELTDL PDIVEVVSQR PEKFIVFSDD LSFDEGEPGY KALKSILDGS IAAATPNVLI YATSNRRHLL PEYMKDNLSY THTEDGEVHP GEVIEEKISL SERFGLWVSF YPFSQNEYLA IVAQWLSSFG VDAAAIEAAR PEALVWALER GSRSGRVAYQ FARDYAGRAT A
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