| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4227 |
|---|
| Symbol | |
|---|
| ID | 7971311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 4467997 |
|---|
| End bp | 4468209 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644794814 |
|---|
| Product | protein of unknown function DUF329 |
|---|
| Protein accession | YP_002946106 |
|---|
| Protein GI | 239817196 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3024] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0310228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG TGAACAAGAT CGGCGAGCGG ATCGTCCGCT GCCCCTCGTG TGGCGGCGAC
AGTGTCTACG CCGAACGCAA CCCCTACCGC CCGTTCTGCA GCGCACGCTG CAAGGGCATC
GATTTCGGCG CCTGGGCCAG CGAGGAATTC CGGATGCCGG CCGAAGCGCC GGCCGACGAC
GAGCCTTTCG GCGATCCGAA GAAAGTCCAG TAG
|
|---|
| Protein sequence | MSDVNKIGER IVRCPSCGGD SVYAERNPYR PFCSARCKGI DFGAWASEEF RMPAEAPADD
EPFGDPKKVQ
|
|---|
| |