| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4217 |
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| Symbol | rpmA |
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| ID | 7971300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4457970 |
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| End bp | 4458227 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794803 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_002946096 |
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| Protein GI | 239817186 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAGA AAAAAGGCGG CGGCTCAACG CGAAACGGGC GCGATTCCAA GCCCAAGATG
CTCGGTGTGA AGGCCTTCGG CGGCGAACTG ATCAGCGCAG GCTCGATCAT CGTGCGCCAG
CGCGGCACCC AGTTCCACCC CGGCGTGAAC GTCGGCGTGG GCAAGGACCA CACGCTGTTT
GCACTGGTGG ACGGCCACGT GTCGTTCGGT GTCAAGGGCG CACTGAACAA GCACATGGTC
AACGTGACCC CGGCATAA
|
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| Protein sequence | MAQKKGGGST RNGRDSKPKM LGVKAFGGEL ISAGSIIVRQ RGTQFHPGVN VGVGKDHTLF
ALVDGHVSFG VKGALNKHMV NVTPA
|
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